RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ROR1Q01973 937 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 PLD1Q13393 1074 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 EIF4EBP2Q13542 120 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CUL1Q13616 776 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 TAF5Q15542 800 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ELF2Q15723 593 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ARL13BQ3SXY8 428 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 DCAF6Q58WW2 860 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 BRMS1LQ5PSV4 323 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ERMARDQ5T6L9 678 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 IER5LQ5T953 404 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 RSPO2Q6UXX9 243 aaPredicted RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 DENND5BQ6ZUT9 1274 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 MTSS1LQ765P7 747 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 SND1Q7KZF4 910 aaKnown RBP eCLIP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 GPRIN1Q7Z2K8 1008 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 TADA2BQ86TJ2 420 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CCDC50Q8IVM0 306 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 DEFB106AQ8N104 65 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 PRELID2Q8N945 189 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 LRRN4CLQ8ND94 238 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CCHCR1Q8TD31 782 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 KCNV2Q8TDN2 545 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CLEC4CQ8WTT0 213 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 SEC14L1Q92503 715 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 TRMT2BQ96GJ1 504 aaKnown RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 PKNOX2Q96KN3 472 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 VN1R3Q9BXE9 311 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 RAB17Q9H0T7 212 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 SMOC2Q9H3U7 446 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 POMKQ9H5K3 350 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 ANKZF1Q9H8Y5 726 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 HCSTQ9UBK5 93 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 RASAL2Q9UJF2 1139 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 MRPS17Q9Y2R5 130 aaKnown RBP9.46□□□□□ -0.9
NR1I3-228ENST00000511676 CDY1Q9Y6F8 540 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 VWA8A3KMH1 1905 aa9.46□□□□□ -0.9
NR1I3-228ENST00000511676 WDR27A2RRH5 827 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 NT5C1B-RDH14C9J2C7 533 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 APOC4-APOC2K7ER74 178 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 FOXD2O60548 495 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 LILRB3O75022 631 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 XYLBO75191 536 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 APOC2P02655 101 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 FYNP06241 537 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 USP17L7P0C7H9 530 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 CSH1P0DML2 217 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 CSH2P0DML3 217 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 RARAP10276 462 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 RALAP11233 206 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 TGM2P21980 687 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 YWHAQP27348 245 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 GBP2P32456 591 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 ID4P47928 161 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 HCAR3P49019 387 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 CXCR3P49682 368 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 SULT1E1P49888 294 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 TUBP50607 506 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 KPNA1P52294 538 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 YWHAGP61981 247 aaKnown RBP eCLIP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 DEUP1Q05D60 604 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 C2orf54Q08AI8 447 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 ZNF211Q13398 564 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 C15orf59Q2T9L4 293 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 SNX30Q5VWJ9 437 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 BSPRYQ5W0U4 402 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 KLHDC10Q6PID8 442 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 RNF19BQ6ZMZ0 732 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 CPNE8Q86YQ8 564 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 IFT20Q8IY31 132 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 TCEAL8Q8IYN2 117 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 KCTD6Q8NC69 237 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 FLCNQ8NFG4 579 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 TSC1Q92574 1164 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 MYRFLQ96LU7 910 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 SERPINB11Q96P15 392 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 CLSTN3Q9BQT9 956 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 WDR6Q9NNW5 1121 aaKnown RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 TLR8Q9NR97 1041 aaKnown RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 UXTQ9UBK9 157 aaPredicted RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 AP4E1Q9UPM8 1137 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 DRG1Q9Y295 367 aaKnown RBP9.45□□□□□ -0.9
NR1I3-228ENST00000511676 ASB3Q9Y575 518 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 RAD54BQ9Y620 910 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 TECTAO75443 2155 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 CLUHO75153 1309 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 ZNF318Q5VUA4 2279 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 PLXNA3P51805 1871 aa9.45□□□□□ -0.9
NR1I3-228ENST00000511676 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
NR1I3-228ENST00000511676 CCDC195A0A1B0GUA6 201 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 IRAK2O43187 625 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 ATP8B1O43520 1251 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 GRAP2O75791 330 aa9.44□□□□□ -0.9
NR1I3-228ENST00000511676 VNN2O95498 520 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms