RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 A0A1W2PPZ6 126 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 FAM92AA1XBS5 289 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 K7ESF4 209 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 TRDMT1O14717 391 aaKnown RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 SLC16A3O15427 465 aaKnown RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 COCHO43405 550 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 CILPO75339 1184 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 EGFP01133 1207 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 GHRHP01286 108 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 MBL2P11226 248 aaPredicted RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 BMP6P22004 513 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 GALK1P51570 392 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 SLC7A9P82251 487 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 FKBP3Q00688 224 aaKnown RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 GRSF1Q12849 480 aaKnown RBP eCLIP9.08□□□□□ -0.96
PDPN-209ENST00000510906 SPRED3Q2MJR0 410 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 CBWD6Q4V339 395 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 DCAF17Q5H9S7 520 aaPredicted RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 CBWD3Q5JTY5 395 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 CBWD5Q5RIA9 395 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 TCERG1LQ5VWI1 586 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 GPRIN1Q7Z2K8 1008 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 DCLK2Q8N568 766 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 FBXL13Q8NEE6 735 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 PDZD8Q8NEN9 1154 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 EZH1Q92800 747 aaPredicted RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 ATP2A3Q93084 1043 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 JAKMIP2Q96AA8 810 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 CYFIP2Q96F07 1278 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 HNRNPABQ99729 332 aaKnown RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 NT5C1AQ9BXI3 368 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 CSNK1G1Q9HCP0 422 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 POLR3BQ9NW08 1133 aaPredicted RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 RAB20Q9NX57 234 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 CFAP97Q9P2B7 532 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
PDPN-209ENST00000510906 OTOGLQ3ZCN5 2332 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
PDPN-209ENST00000510906 OBSL1O75147 1896 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 KIF26AQ9ULI4 1882 aaPredicted RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 CHURC1-FNTBB4DL54 471 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 HHLA1C9JL84 531 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 BIN1O00499 593 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 PSMA7O14818 248 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 STX10O60499 249 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 PAPSS2O95340 614 aaPredicted RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 NFATC1O95644 943 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 CYP17A1P05093 508 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 ZDHHC11BP0C7U3 371 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 FAM200BP0CF97 657 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 ADH7P40394 386 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 MAP2K3P46734 347 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 FNTBP49356 437 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 AMPD2Q01433 879 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 LRRC63Q05C16 580 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 PPP2R5DQ14738 602 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 GAB4Q2WGN9 574 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 HECTD3Q5T447 861 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 SNX30Q5VWJ9 437 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 HEATR6Q6AI08 1181 aaKnown RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 KLHL10Q6JEL2 608 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 CLEC20AQ6ZU45 233 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 FILIP1Q7Z7B0 1213 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 ELOA2Q8IYF1 753 aaPredicted RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 SYNPOQ8N3V7 929 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 CCDC150Q8NCX0 1101 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 OVCA2Q8WZ82 227 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 RUBCNQ92622 972 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 CD101Q93033 1021 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 WBP2Q969T9 261 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 P2RY13Q9BPV8 354 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 FAM126AQ9BYI3 521 aaPredicted RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 CEP44Q9C0F1 390 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 EPC1Q9H2F5 836 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 CAPN10Q9HC96 672 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 CISHQ9NSE2 258 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 FRRS1LQ9P0K9 344 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 ARMCX3Q9UH62 379 aaPredicted RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 RALYQ9UKM9 306 aaKnown RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 SMG5Q9UPR3 1016 aaKnown RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 PTPRDP23468 1912 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 FRYLO94915 3013 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 BPTFQ12830 3046 aa9.07□□□□□ -0.96
PDPN-209ENST00000510906 GCN1Q92616 2671 aaKnown RBP9.07□□□□□ -0.96
PDPN-209ENST00000510906 ANTXRLA6NF34 631 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 CYP26A1O43174 497 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 TLR5O60602 858 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 FBXO24O75426 580 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
PDPN-209ENST00000510906 TBX18O95935 607 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 TRIM21P19474 475 aaKnown RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 ACO1P21399 889 aaKnown RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 DRD1P21728 446 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 OPRD1P41143 372 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 PXNP49023 591 aaPredicted RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 RAD23BP54727 409 aa9.06□□□□□ -0.96
PDPN-209ENST00000510906 SRSF5Q13243 272 aaKnown RBP9.06□□□□□ -0.96
PDPN-209ENST00000510906 STIM1Q13586 685 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms