RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 NELFBQ8WX92 580 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 EDEM1Q92611 657 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 HSFY1Q96LI6 401 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 STOML2Q9UJZ1 356 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 PLA2G4CQ9UP65 541 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 ADAMTS9Q9P2N4 1935 aa13.19□□□□□ -0.3
KDM3B-206ENST00000509468 UPK3BL1B0FP48 263 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 UPK3BL2E5RIL1 263 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
KDM3B-206ENST00000509468 FBXO21O94952 628 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 CD6P30203 668 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 IL12RB1P42701 662 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 MAPK8P45983 427 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 GCNT1Q02742 428 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 MORC3Q14149 939 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 FUT11Q495W5 492 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 PMF1Q6P1K2 205 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 TMPRSS6Q8IU80 811 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 RGL4Q8IZJ4 473 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 ZNF557Q8N988 423 aaPredicted RBP13.18□□□□□ -0.3
KDM3B-206ENST00000509468 CADM4Q8NFZ8 388 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 LMO3Q8TAP4 145 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 TFAP2BQ92481 460 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 PRCCQ92733 491 aaPredicted RBP13.18□□□□□ -0.3
KDM3B-206ENST00000509468 AZIN2Q96A70 460 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 P2RY11Q96G91 374 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 CIPCQ9C0C6 399 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 SUSD2Q9UGT4 822 aa13.18□□□□□ -0.3
KDM3B-206ENST00000509468 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.18□□□□□ -0.3
KDM3B-206ENST00000509468 SPTBN2O15020 2390 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 ARHGAP33O14559 1287 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 GIPC1O14908 333 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 IRAK2O43187 625 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 ACADMP11310 421 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 SLC11A2P49281 568 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 KCNH2Q12809 1159 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 ZNF234Q14588 700 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 ST3GAL2Q16842 350 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 NUGGCQ68CJ6 796 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 SERPINA13PQ6UXR4 307 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 RRAGAQ7L523 313 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 SLC41A1Q8IVJ1 513 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 WFIKKN2Q8TEU8 576 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 ERLEC1Q96DZ1 483 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 SIPA1Q96FS4 1042 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 HSPA12BQ96MM6 686 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 DDX50Q9BQ39 737 aaKnown RBP13.17□□□□□ -0.3
KDM3B-206ENST00000509468 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 GTPBP2Q9BX10 602 aaKnown RBP13.17□□□□□ -0.3
KDM3B-206ENST00000509468 SLC6A17Q9H1V8 727 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 CAPN10Q9HC96 672 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 WSB2Q9NYS7 404 aaPredicted RBP13.17□□□□□ -0.3
KDM3B-206ENST00000509468 CLEC4EQ9ULY5 219 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
KDM3B-206ENST00000509468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.17□□□□□ -0.3
KDM3B-206ENST00000509468 M0QYV0 167 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 TSPAN3O60637 253 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 OPHN1O60890 802 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 AFPP02771 609 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 LTFP02788 710 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 ATP5BP06576 529 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 EPHX1P07099 455 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 NCAM1P13591 858 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 BMP6P22004 513 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 HOXD9P28356 352 aaPredicted RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 RDXP35241 583 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 RGS7P49802 495 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 TPMTP51580 245 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 MARSP56192 900 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 RING1Q06587 406 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 ZNF252P-AS1Q0IIN9 211 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 PAK1Q13153 545 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 SEMA3BQ13214 749 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 PLEKHG6Q3KR16 790 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 MPP7Q5T2T1 576 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 TRIM59Q8IWR1 403 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 TOE1Q96GM8 510 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 FAM81BQ96LP2 452 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 TRIM62Q9BVG3 475 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 MKRN2Q9H000 416 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
KDM3B-206ENST00000509468 CNOT1A5YKK6 2376 aaKnown RBP13.16□□□□□ -0.3
KDM3B-206ENST00000509468 ATXN2Q99700 1313 aaKnown RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 GON4LQ3T8J9 2241 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 PIK3R2O00459 728 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 BIN1O00499 593 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 SART1O43290 800 aaKnown RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 MED7O43513 233 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 GABBR2O75899 941 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 IGLV3-27P01718 113 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 KRT5P13647 590 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 BRD2P25440 801 aaKnown RBP13.15□□□□□ -0.3
KDM3B-206ENST00000509468 HLA-FP30511 346 aa13.15□□□□□ -0.3
KDM3B-206ENST00000509468 ACADSBP45954 432 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms