RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 STC2O76061 302 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 CYBBP04839 570 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TYRP14679 529 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 CORO1AP31146 461 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 HOXA6P31267 233 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 HNRNPH3P31942 346 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 GBP1P32455 592 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 CHKAP35790 457 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TNFRSF4P43489 277 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 GABRB2P47870 512 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 HARS2P49590 506 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 EIF4EBP2Q13542 120 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 CLEC16AQ2KHT3 1053 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 GAB4Q2WGN9 574 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 EOGTQ5NDL2 527 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 EMC10Q5UCC4 262 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 SYPL2Q5VXT5 272 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 BSPRYQ5W0U4 402 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 SPECC1LQ69YQ0 1117 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 SDE2Q6IQ49 451 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 ANO7Q6IWH7 933 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 MON1BQ7L1V2 547 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 CACNA2D4Q7Z3S7 1137 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TMC6Q7Z403 805 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TRMT11Q7Z4G4 463 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 XYLT1Q86Y38 959 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 DENND1CQ8IV53 801 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 SCML4Q8N228 414 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 PGBD3Q8N328 593 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 ALLCQ8N6M5 410 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 GPR161Q8N6U8 529 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TXNDC5Q8NBS9 432 aaKnown RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 GAB3Q8WWW8 586 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 MRFAP1L1Q96HT8 127 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 HSFY1Q96LI6 401 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 DNAJC7Q99615 494 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 AGPAT1Q99943 283 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 TRIM5Q9C035 493 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 POLMQ9NP87 494 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 ANLNQ9NQW6 1124 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 CNGB3Q9NQW8 809 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 PLK2Q9NYY3 685 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 MYO6Q9UM54 1294 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 DAAM1Q9Y4D1 1078 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 WDR87Q6ZQQ6 2873 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 GPR179Q6PRD1 2367 aa9.12□□□□□ -0.95
PDLIM5-213ENST00000509357 A0A087X0T9 212 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 CCDC163A0A0D9SF12 145 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ANTXRLA6NF34 631 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 MSI1O43347 362 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 GRAP2O75791 330 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ADCY5O95622 1261 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 KLKB1P03952 638 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 RETP07949 1114 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 FAM228BP0C875 321 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 FERP16591 822 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 MMP8P22894 467 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 KRT9P35527 623 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ID4P47928 161 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 DGKGP49619 791 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ZBED6P86452 979 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 CENPCQ03188 943 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 SPEM2Q0P670 501 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ASIC2Q16515 512 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 CRY1Q16526 586 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 USP39Q53GS9 565 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 SFMBT2Q5VUG0 894 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 SMYD5Q6GMV2 418 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 MMS22LQ6ZRQ5 1243 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 TMEM139Q8IV31 216 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 FMNL3Q8IVF7 1028 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 SFTPA1Q8IWL2 248 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ZNF276Q8N554 614 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ZNF513Q8N8E2 541 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 JOSD2Q8TAC2 188 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 DDI1Q8WTU0 396 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 FAM149B1Q96BN6 582 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 PLD4Q96BZ4 506 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 MYEOVQ96EZ4 313 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 PPP1R13BQ96KQ4 1090 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 TPSD1Q9BZJ3 242 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 EDEM3Q9BZQ6 932 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 TRIM7Q9C029 511 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ZDHHC4Q9NPG8 344 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ABCC13Q9NSE7 274 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 ABHD10Q9NUJ1 306 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 SFMBT1Q9UHJ3 866 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 MMP17Q9ULZ9 603 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 NAALADL1Q9UQQ1 740 aa9.11□□□□□ -0.95
PDLIM5-213ENST00000509357 GVINP1Q7Z2Y8 2422 aa9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 SGK1O00141 431 aa9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 CAPN9O14815 690 aa9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 TRIM24O15164 1050 aa9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 MAP3K13O43283 966 aa9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 SART1O43290 800 aaKnown RBP9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 CBFA2T2O43439 604 aa9.1□□□□□ -0.95
PDLIM5-213ENST00000509357 CACNG3O60359 315 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms