RNA–Protein interactions for RNA: ENST00000509290.1

SEL1L3-205, Transcript of SEL1L family member 3, humanhuman

TSL 2

Gene SEL1L3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-205ENST00000509290 CLMNQ96JQ2 1002 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 CLPTM1LQ96KA5 538 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 NUP88Q99567 741 aaPredicted RBP4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 LLPHQ9BRT6 129 aaKnown RBP4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 C1QTNF7Q9BXJ2 289 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 SLC29A3Q9BZD2 475 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 UBA5Q9GZZ9 404 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 SLC5A4Q9NY91 659 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 TMOD2Q9NZR1 351 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 CHMP5Q9NZZ3 219 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 NYAP2Q9P242 653 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 PCDHB1Q9Y5F3 818 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 MYH1P12882 1939 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 NAV1Q8NEY1 1877 aa4.79□□□□□ -1.64
SEL1L3-205ENST00000509290 FRMPD2Q68DX3 1309 aaPredicted RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 ADGRA2Q96PE1 1338 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 CCDC154A6NI56 674 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 PRPF3O43395 683 aaKnown RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 EDIL3O43854 480 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 CTNND1O60716 968 aaKnown RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 TTLL1O95922 423 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 NDUFB10O96000 172 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 RHOP08100 348 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 CELA2AP08217 269 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 PDHBP11177 359 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 SLC16A2P36021 539 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 ZNF81P51508 661 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 RCAN1P53805 252 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 SLC16A1P53985 500 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 SNAP25P60880 206 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 ZNF543Q08ER8 600 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 HLXQ14774 488 aaPredicted RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 EARS2Q5JPH6 523 aaKnown RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 USP50Q70EL3 339 aaPredicted RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 CATIPQ7Z7H3 387 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 IQCA1Q86XH1 822 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 DDX42Q86XP3 938 aaKnown RBP eCLIP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 SPICE1Q8N0Z3 855 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 TMTC2Q8N394 836 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 B3GALNT2Q8NCR0 500 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 PIBF1Q8WXW3 757 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 SMG7Q92540 1137 aaKnown RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 CDCA5Q96FF9 252 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 CCDC17Q96LX7 622 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 KAT14Q9H8E8 782 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 MKS1Q9NXB0 559 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 ORC3Q9UBD5 711 aaPredicted RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 HERC5Q9UII4 1024 aaKnown RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 STX8Q9UNK0 236 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 SMC3Q9UQE7 1217 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 WNT6Q9Y6F9 365 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 ECM29Q5VYK3 1845 aa4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 GREB1LQ9C091 1923 aaPredicted RBP4.78□□□□□ -1.64
SEL1L3-205ENST00000509290 BAZ2BQ9UIF8 2168 aaKnown RBP4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 KLRF2D3W0D1 207 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 E7ENX8 843 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 F5H6K3 240 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 STX6O43752 255 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 NPTX2P47972 431 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 SOX10P56693 466 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 TAP2Q03519 686 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 ICA1Q05084 483 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 PIGFQ07326 219 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 KLRC3Q07444 240 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 CST9Q5W186 159 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 FCRLBQ6BAA4 426 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 GADL1Q6ZQY3 521 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 CLEC17AQ6ZS10 378 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 TMEM179Q6ZVK1 233 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 RASAL3Q86YV0 1011 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 APOBEC3FQ8IUX4 373 aaKnown RBP4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 POC1BQ8TC44 478 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 MTMR8Q96EF0 704 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 FAXDC2Q96IV6 333 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 TRIB1Q96RU8 372 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 PIGSQ96S52 555 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 MAP3K14Q99558 947 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 P2RX7Q99572 595 aaKnown RBP4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 SLC26A6Q9BXS9 759 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 FTOQ9C0B1 505 aaKnown RBP eCLIP4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 JMJD4Q9H9V9 463 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 KLC4Q9NSK0 619 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 FBXO28Q9NVF7 368 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 MRPS18AQ9NVS2 196 aaKnown RBP4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 MCM8Q9UJA3 840 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 KCNJ14Q9UNX9 436 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 TMX2Q9Y320 296 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 PRKAB1Q9Y478 270 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 LAMB1P07942 1786 aa4.77□□□□□ -1.65
SEL1L3-205ENST00000509290 ERICH2A1L162 156 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 WDR91A4D1P6 747 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 KRTAP29-1A8MX34 341 aaPredicted RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 BAG4O95429 457 aaKnown RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 PRKCGP05129 697 aa4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 HSP90AA1P07900 732 aaKnown RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 PARP1P09874 1014 aaKnown RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 LPOP22079 712 aaPredicted RBP4.76□□□□□ -1.65
SEL1L3-205ENST00000509290 TOB1P50616 345 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms