RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 RPS6KL1Q9Y6S9 549 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.75□□□□□ -0.05
TRIM41-204ENST00000508930 TCRBV5S1A1TA0A578 114 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 PLIN3O60664 434 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 TNNC2P02585 160 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 HMGCRP04035 888 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 NPR1P16066 1061 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 KBTBD6Q86V97 674 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 CAND1Q86VP6 1230 aaKnown RBP14.75□□□□□ -0.05
TRIM41-204ENST00000508930 MPP5Q8N3R9 675 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 GFM2Q969S9 779 aaKnown RBP14.75□□□□□ -0.05
TRIM41-204ENST00000508930 ZNF778Q96MU6 729 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 CPXM1Q96SM3 734 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 DCDC2Q9UHG0 476 aa14.75□□□□□ -0.05
TRIM41-204ENST00000508930 FGF3P11487 239 aaPredicted RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 CCND2P30279 289 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 ZNF132P52740 706 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 CLDN10P78369 228 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 CRADDP78560 199 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 SLC44A4Q53GD3 710 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 UNC5BQ8IZJ1 945 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 CLEC4DQ8WXI8 215 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 LRRC39Q96DD0 335 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 H0YIN7 160 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 THRAP10827 490 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 TNFSF9P41273 254 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 GK3PQ14409 553 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 PDK1Q15118 436 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 LPCAT2Q7L5N7 544 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 AHI1Q8N157 1196 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 METTL25Q8N6Q8 603 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 KYQ8NBH2 561 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 LENG8Q96PV6 779 aaPredicted RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 DNAJC28Q9NX36 388 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 CASQ2O14958 399 aaPredicted RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 MAGEB3O15480 346 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 CPA3P15088 417 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 NELFEP18615 380 aaKnown RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 GARSP41250 739 aaKnown RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 MTTPP55157 894 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 C15orf59Q2T9L4 293 aaPredicted RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 ZNF554Q86TJ5 538 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 RDM1Q8NG50 284 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 SDCBP2Q9H190 292 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 XPNPEP3Q9NQH7 507 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 MKS1Q9NXB0 559 aa14.74□□□□□ -0.05
TRIM41-204ENST00000508930 COL5A3P25940 1745 aaPredicted RBP14.74□□□□□ -0.05
TRIM41-204ENST00000508930 WDR27A2RRH5 827 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 DENRO43583 198 aaKnown RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 GPD1P21695 349 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 CNTFP26441 200 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 CDH8P55286 799 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 BAATQ14032 418 aaPredicted RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 ADGRE1Q14246 886 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 LPIN1Q14693 890 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 XKR3Q5GH77 459 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 SH3PXD2AQ5TCZ1 1133 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 CCDC60Q8IWA6 550 aaPredicted RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 BHLHE22Q8NFJ8 381 aaPredicted RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 RXFP2Q8WXD0 754 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 HSPBAP1Q96EW2 488 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 RNF157Q96PX1 679 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 NUF2Q9BZD4 464 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 JPH1Q9HDC5 661 aaPredicted RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 PXMP2Q9NR77 195 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 COL24A1Q17RW2 1714 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 H3BNX3 289 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 NPM3O75607 178 aaKnown RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 ERBB2P04626 1255 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 NR3C2P08235 984 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 ADRM1Q16186 407 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 NRF1Q16656 503 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 PPM1JQ5JR12 505 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 UBA3Q8TBC4 463 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 FNIP1Q8TF40 1166 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 TMA16Q96EY4 203 aaKnown RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 RTKNQ9BST9 563 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 MRIQ9BWK5 157 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 HAPLN2Q9GZV7 340 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 COG4Q9H9E3 785 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 TCF7L2Q9NQB0 619 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 STK39Q9UEW8 545 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 TDRKHQ9Y2W6 561 aaKnown RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 MAGEA8P43361 318 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 HSPA13P48723 471 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 AP3M2P53677 418 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 TUBB3Q13509 450 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 ZNF667Q5HYK9 610 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 ZFP1Q6P2D0 407 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 CDKL3Q8IVW4 592 aaPredicted RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 GCOM2Q9BZD3 368 aaPredicted RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 LIN28AQ9H9Z2 209 aaKnown RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 PAIP2BQ9ULR5 123 aaKnown RBP14.73□□□□□ -0.05
TRIM41-204ENST00000508930 PCDHGB4Q9UN71 923 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 PCDHGB5Q9Y5G0 923 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 PCDHA11Q9Y5I1 949 aa14.73□□□□□ -0.05
TRIM41-204ENST00000508930 FAM159BA6NKW6 160 aa14.72□□□□□ -0.05
TRIM41-204ENST00000508930 POLRMTO00411 1230 aaKnown RBP14.72□□□□□ -0.05
TRIM41-204ENST00000508930 ACAT1P24752 427 aaKnown RBP14.72□□□□□ -0.05
TRIM41-204ENST00000508930 GRIA1P42261 906 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms