RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 COL4A1P02462 1669 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 BRCA1P38398 1863 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ARFGEF1Q9Y6D6 1849 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NPHP3-ACAD11A0A0J9YXS1 232 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 C17orf113A0A1B0GUU1 675 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 A0A1W2PQU0 124 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LRRIQ3A6PVS8 624 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 PDE8BO95263 885 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MCF2P10911 925 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ARNTP27540 789 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 HLA-FP30511 346 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ARL1P40616 181 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NRIP1P48552 1158 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RGS7P49802 495 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ATP5IP56385 69 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NPRL3Q12980 569 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LDLRAD1Q5T700 205 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 CREB3L3Q68CJ9 461 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MIS18BP1Q6P0N0 1132 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 B3GNT6Q6ZMB0 384 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ARHGAP36Q6ZRI8 547 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC70Q7Z2Q7 622 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 HEATR3Q7Z4Q2 680 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ZGPATQ8N5A5 531 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 RASGEF1AQ8N9B8 481 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 FBXO18Q8NFZ0 1043 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MYO19Q96H55 970 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 VRK1Q99986 396 aaPredicted RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF416Q9BWM5 594 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 NCOR1P1Q9H4R4 102 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 WASH6PQ9NQA3 447 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 DMRT3Q9NQL9 472 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 ANGEL1Q9UNK9 670 aaKnown RBP4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MYH8P13535 1937 aa4.05□□□□□ -1.76
NEDD4-209ENST00000508871 MYH2Q9UKX2 1941 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TCRBV16S1A1N1A0A5B0 115 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 NFKBIEO00221 500 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 HNRNPDLO14979 420 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 HOXC11O43248 304 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PNPP00491 289 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CPT2P23786 658 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KRT2P35908 639 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 MTIF2P46199 727 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 MAP3K10Q02779 954 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SRSF11Q05519 484 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ZNF252P-AS1Q0IIN9 211 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SNAPC2Q13487 334 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ZC3H12AQ5D1E8 599 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CYP20A1Q6UW02 462 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PRR18Q8N4B5 295 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 FANCBQ8NB91 859 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CEP19Q96LK0 163 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 NSMCE2Q96MF7 247 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 C7orf26Q96N11 449 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 NECAB3Q96P71 396 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 FAM111AQ96PZ2 611 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 DBNDD2Q9BQY9 259 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SLC28A3Q9HAS3 691 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CHMP1AQ9HD42 196 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SSX2IPQ9Y2D8 614 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 COL2A1P02458 1487 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PSMD9O00233 223 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 VPS4BO75351 444 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 KRT36O76013 467 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RLN1P04808 185 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RARGP13631 454 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 NME2P22392 152 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 AKAP5P24588 427 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CARD18P57730 90 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ACTR2P61160 394 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RUNX1T1Q06455 604 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 STX5Q13190 355 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PRAMEF14Q5SWL7 426 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GTF2IRD2BQ6EKJ0 949 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SNRNP48Q6IEG0 339 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CEP68Q76N32 757 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TAOK1Q7L7X3 1001 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 GTF2IRD2Q86UP8 949 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 IQCHQ86VS3 1027 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CCDC50Q8IVM0 306 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 C3orf58Q8NDZ4 430 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PIGOQ8TEQ8 1089 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 ASB12Q8WXK4 309 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 TAAR9Q96RI9 348 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SLC32A1Q9H598 525 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RUBCNLQ9H714 662 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 IPPKQ9H8X2 491 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 LRRC40Q9H9A6 602 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SPATA6Q9NWH7 488 aaPredicted RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 RGL1Q9NZL6 768 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CLEC1BQ9P126 229 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 CPNE7Q9UBL6 633 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PAIP2BQ9ULR5 123 aaKnown RBP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 NIP7Q9Y221 180 aaKnown RBP eCLIP4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SNX9Q9Y5X1 595 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 V9GYQ6 96 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 EML1O00423 815 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 PJA2O43164 708 aa4.04□□□□□ -1.76
NEDD4-209ENST00000508871 SULT1B1O43704 296 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms