RNA–Protein interactions for RNA: ENST00000508608.5

CAST-223, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAST, Length 2,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-223ENST00000508608 NAT9Q9BTE0 207 aa13.46□□□□□ -0.25
CAST-223ENST00000508608 ZNF395Q9H8N7 513 aaPredicted RBP13.46□□□□□ -0.25
CAST-223ENST00000508608 PRDM16Q9HAZ2 1276 aa13.46□□□□□ -0.25
CAST-223ENST00000508608 EIF2B3Q9NR50 452 aaKnown RBP13.46□□□□□ -0.25
CAST-223ENST00000508608 A0A087WZ62 844 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 A0A0A0MRY4 1105 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 ENO4A6NNW6 628 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SOCS7O14512 581 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 CLGNO14967 610 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 PAPSS1O43252 624 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 SERPINE1P05121 402 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 CYP2C8P10632 490 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 ARF4P18085 180 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 SCNN1AP37088 669 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SATB1Q01826 763 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 UBAP2LQ14157 1087 aaKnown RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 CASC4Q6P4E1 433 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 RFX8Q6ZV50 586 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SCUBE3Q8IX30 993 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SLC35F5Q8WV83 523 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 TFB1MQ8WVM0 346 aaKnown RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 HTR3CQ8WXA8 447 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 GATA6Q92908 595 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 CPB2Q96IY4 423 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SPATA13Q96N96 652 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SH3GL3Q99963 347 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 LBHD1Q9BQE6 289 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 FDXACB1Q9BRP7 624 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 C20orf27Q9GZN8 174 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 GTF2IRD1Q9UHL9 959 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 OTOFQ9HC10 1997 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 PGAM1P18669 254 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 SLC1A6P48664 564 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 CACNA2D1P54289 1103 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 IGBP1P78318 339 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 NIPAL4Q0D2K0 466 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 VGLL4Q14135 290 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 SLC26A9Q7LBE3 791 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 CENPIQ92674 756 aaPredicted RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
CAST-223ENST00000508608 KIF12Q96FN5 646 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 EBF4Q9BQW3 602 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
CAST-223ENST00000508608 CCDC28BQ9BUN5 200 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 PPP1R12CQ9BZL4 782 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 VCX3BQ9H321 246 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 AKT3Q9Y243 479 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 DNAJC16Q9Y2G8 782 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 LTBP3Q9NS15 1303 aa13.45□□□□□ -0.26
CAST-223ENST00000508608 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 TPP1O14773 563 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 PLIN3O60664 434 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 TXNP10599 105 aaKnown RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 FGF3P11487 239 aaPredicted RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 CRABP2P29373 138 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 CPOXP36551 454 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 COPAP53621 1224 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 SLC10A2Q12908 348 aaPredicted RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 PRKG1Q13976 671 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 INSCQ1MX18 579 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 EFHC1Q5JVL4 640 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 TEDDM1Q5T9Z0 273 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 LRRC8BQ6P9F7 803 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 IZUMO2Q6UXV1 221 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 PACS1Q6VY07 963 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 GADL1Q6ZQY3 521 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 ACOT1Q86TX2 421 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 FBXO16Q8IX29 292 aaPredicted RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 KBTBD2Q8IY47 623 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 SPDYE1Q8NFV5 336 aaPredicted RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 ZBTB10Q96DT7 871 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 IFT43Q96FT9 208 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 CLPTM1LQ96KA5 538 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 CSPG4P5Q96PW8 444 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 FAM192AQ9GZU8 254 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 XPNPEP3Q9NQH7 507 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 FAM49BQ9NUQ9 324 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 DNAJC28Q9NX36 388 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 RCOR3Q9P2K3 495 aaPredicted RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 PAPPA2Q9BXP8 1791 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 SCN1AP35498 2009 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 CSDE1O75534 798 aaKnown RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 PGK2P07205 417 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 ARL4AP40617 200 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 GARSP41250 739 aaKnown RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 RPL10AP62906 217 aaKnown RBP13.44□□□□□ -0.26
CAST-223ENST00000508608 IRX4P78413 519 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 TUBB3Q13509 450 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 KCTD2Q14681 263 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 RABGAP1LQ5R372 815 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 FAM182AQ5T1J6 154 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 JADE3Q92613 823 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 FGD4Q96M96 766 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 ECSITQ9BQ95 431 aa13.44□□□□□ -0.26
CAST-223ENST00000508608 C11orf84Q9BUA3 381 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms