RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZC3H11AO75152 810 aaKnown RBP eCLIP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 DDHD2O94830 711 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 C1RP00736 705 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 AFPP02771 609 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 C4BPAP04003 597 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 GALTP07902 379 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 P4HA1P13674 534 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZNF18P17022 549 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 PAMP19021 973 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 CDK11BP21127 795 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 IBSPP21815 317 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MTIF2P46199 727 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MXI1P50539 228 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 BCAR1P56945 870 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 GABREP78334 506 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TFAMQ00059 246 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRPC3Q13507 836 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 KCNJ12Q14500 433 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 IQCB1Q15051 598 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MAN2A1Q16706 1144 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 UPP1Q16831 310 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 SGSM1Q2NKQ1 1148 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 PAN2Q504Q3 1202 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TCP11X2Q5H9J9 407 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 E4F1Q66K89 784 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 FAM109BQ6ICB4 259 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 KCNT2Q6UVM3 1135 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 C15orf39Q6ZRI6 1047 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 C11orf57Q6ZUT1 292 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MAMDC2Q7Z304 686 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRAPPC11Q7Z392 1133 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZNF280BQ86YH2 543 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 EFCAB13Q8IY85 973 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 SLC39A11Q8N1S5 342 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TTC39CQ8N584 583 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 COLGALT1Q8NBJ5 622 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 FBXO15Q8NCQ5 510 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 SLC35C1Q96A29 364 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 CCDC127Q96BQ5 260 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TIFAQ96CG3 184 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MFSD3Q96ES6 412 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM169Q96HH4 297 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 CNOT6LQ96LI5 555 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZMAT2Q96NC0 199 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MED15Q96RN5 788 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 TUBGCP2Q9BSJ2 902 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 C11orf84Q9BUA3 381 aaPredicted RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 IMPG2Q9BZV3 1241 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 DNAI2Q9GZS0 605 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 LMAN2LQ9H0V9 348 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 DPP3Q9NY33 737 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 SPG21Q9NZD8 308 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 COQ4Q9Y3A0 265 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 DAAM1Q9Y4D1 1078 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 LAMA2P24043 3122 aaKnown RBP5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 LAMA3Q16787 3333 aa5.87□□□□□ -1.47
HMGB1P44-201ENST00000508597 MYO7AQ13402 2215 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 SF3B1O75533 1304 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 FSD2A1L4K1 749 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 BLACEA4D250 179 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 OR14I1A6ND48 311 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 H3BNC9 293 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 NRP1O14786 923 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 SYN3O14994 580 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TADA2AO75478 443 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 B3GAT3O94766 335 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TPM3P06753 285 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 CA3P07451 260 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 LINC00271P0C7V0 271 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TYMPP19971 482 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 CTNNB1P35222 781 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 OR1G1P47890 313 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 SLC11A1P49279 550 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 FMO5P49326 533 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 AARSP49588 968 aaKnown RBP eCLIP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TAF6P49848 677 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 GATMP50440 423 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 CLCNKBP51801 687 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 RABGGTBP53611 331 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 LILRA4P59901 499 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 YBX1P67809 324 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 CREMQ03060 361 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TAP1Q03518 808 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 BIRC3Q13489 604 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 PTPROQ16827 1216 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 FILIP1LQ4L180 1135 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 VWA3BQ502W6 1294 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 EPC2Q52LR7 807 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TM4SF20Q53R12 229 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 DCAF17Q5H9S7 520 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 GLRA4Q5JXX5 417 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TCERG1LQ5VWI1 586 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 C9orf57Q5W0N0 161 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 RPTNQ6XPR3 784 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMCO2Q7Z6W1 182 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 DDX53Q86TM3 631 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 DHX40Q8IX18 779 aaKnown RBP5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 TMEM86AQ8N2M4 240 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 AOPEPQ8N6M6 819 aa5.86□□□□□ -1.47
HMGB1P44-201ENST00000508597 FBXL13Q8NEE6 735 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms