RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PIWIL1Q96J94 861 aaKnown RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 CCDC42Q96M95 316 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 P2RY13Q9BPV8 354 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 BBS2Q9BXC9 721 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 SLC2A11Q9BYW1 496 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 ISCUQ9H1K1 167 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 LINC00597Q9H2U6 94 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 TJP2Q9UDY2 1190 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 STOML2Q9UJZ1 356 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 TMEM59LQ9UK28 342 aa9.5□□□□□ -0.89
NUP54-207ENST00000508583 AGO1Q9UL18 857 aaKnown RBP9.5□□□□□ -0.89
NUP54-207ENST00000508583 MIA3Q5JRA6 1907 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 TMCO5BA8MYB1 307 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 DDX3XO00571 662 aaKnown RBP eCLIP9.49□□□□□ -0.893e-11■■□□□ 12
NUP54-207ENST00000508583 TRDMT1O14717 391 aaKnown RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 CACNG3O60359 315 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 ACSL4O60488 711 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 GREM1O60565 184 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 APODP05090 189 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 GPD1P21695 349 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 GJA4P35212 333 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 PTPN9P43378 593 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 RPS9P46781 194 aaKnown RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 ADKP55263 362 aaKnown RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 PTP4A2Q12974 167 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 TBX2Q13207 712 aaPredicted RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 TAF5Q15542 800 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 SLC18A3Q16572 532 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 C10orf76Q5T2E6 689 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 MPP7Q5T2T1 576 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 ALKBH5Q6P6C2 394 aaKnown RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 RHBDF2Q6PJF5 856 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 TPGS1Q6ZTW0 290 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 STRADAQ7RTN6 431 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 ADAM32Q8TC27 787 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 DDI1Q8WTU0 396 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 ANP32BQ92688 251 aaKnown RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 NT5C3BQ969T7 300 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 ZNF653Q96CK0 615 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 SLC39A13Q96H72 371 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 FCRL2Q96LA5 508 aaPredicted RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 PANX2Q96RD6 677 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 NPY6RQ99463 290 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 WDCPQ9H6R7 721 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 ARHGAP20Q9P2F6 1191 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 DEC1Q9P2X7 70 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 METRNQ9UJH8 293 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 NDRG2Q9UN36 371 aaKnown RBP9.49□□□□□ -0.89
NUP54-207ENST00000508583 ZDBF2Q9HCK1 2354 aa9.49□□□□□ -0.89
NUP54-207ENST00000508583 SYNJ2BP-COX16A0A087WUM0 186 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 C2CD4BA6NLJ0 364 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 KCNU1A8MYU2 1149 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 NEDD8-MDP1E9PL57 170 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 F5H5T6 163 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 SCAMP3O14828 347 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 ATG13O75143 517 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 RNF8O76064 485 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 ADCY5O95622 1261 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 MOCS2O96007 188 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 PDGFBP01127 241 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 KLKB1P03952 638 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 TYRP14679 529 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 RRM1P23921 792 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 FLT3P36888 993 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 EIF4A3P38919 411 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 GRIA2P42262 883 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 CXCR3P49682 368 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 ZNF143P52747 638 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 AIF1P55008 147 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 OXCT1P55809 520 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 GSDMDP57764 484 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 ACAP1Q15027 740 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 PON2Q15165 354 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 HSF5Q4G112 596 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 C2CD6Q53TS8 623 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 ZC3H12AQ5D1E8 599 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 TMEM196Q5HYL7 178 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 RABGAP1LQ5R372 815 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 CCDC122Q5T0U0 273 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 IER5LQ5T953 404 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 GRAMD4Q6IC98 578 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 PLEKHA7Q6IQ23 1121 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 LRRC31Q6UY01 552 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 TRMT11Q7Z4G4 463 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 CHSY1Q86X52 802 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 TMEM25Q86YD3 366 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 CCDC170Q8IYT3 715 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 HJURPQ8NCD3 748 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 TTC8Q8TAM2 541 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 KCNV2Q8TDN2 545 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 FNIP1Q8TF40 1166 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 RXFP2Q8WXD0 754 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 CTNNBL1Q8WYA6 563 aaPredicted RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 TMA16Q96EY4 203 aaKnown RBP9.48□□□□□ -0.89
NUP54-207ENST00000508583 CFAP57Q96MR6 1250 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 MCEEQ96PE7 176 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 PPP1R9BQ96SB3 815 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 PNKPQ96T60 521 aa9.48□□□□□ -0.89
NUP54-207ENST00000508583 CNPY3Q9BT09 278 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms