RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 SCUBE1Q8IWY4 988 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 CMASQ8NFW8 434 aaPredicted RBP13.27□□□□□ -0.29
SMG7-214ENST00000508461 OR52K1Q8NGK4 314 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 INPP5DQ92835 1189 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 ATXN3LQ9H3M9 355 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 PRDM12Q9H4Q4 367 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 NUDT5Q9UKK9 219 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 MFHAS1Q9Y4C4 1052 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 PPP2R3BQ9Y5P8 575 aa13.27□□□□□ -0.29
SMG7-214ENST00000508461 PDHXO00330 501 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 TP73O15350 636 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 GPC4O75487 556 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 C22orf31O95567 290 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 SLC25A3Q00325 362 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 TTC30AQ86WT1 665 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 YY1AP1Q9H869 796 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 HNRNPCL1O60812 293 aaKnown RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 CD4P01730 458 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 FAM200BP0CF97 657 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 SERPINB5P36952 375 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 BEX3Q00994 111 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 DCAF4L1Q3SXM0 396 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 KHDC1Q4VXA5 237 aaKnown RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 IARS2Q9NSE4 1012 aaKnown RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 CASTOR2A6NHX0 329 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 CXCL11O14625 94 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 PMPCBO75439 489 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 TRPA1O75762 1119 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 GSTA2P09210 222 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 ART3Q13508 389 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 OLIG2Q13516 323 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 RIPK1Q13546 671 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 PPM1JQ5JR12 505 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 RNF148Q8N7C7 305 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 NIPA2Q8N8Q9 360 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 MCRS1Q96EZ8 462 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 PRR11Q96HE9 360 aaPredicted RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 EBNA1BP2Q99848 306 aaKnown RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 FRMD8Q9BZ67 464 aaPredicted RBP13.26□□□□□ -0.29
SMG7-214ENST00000508461 EFR3BQ9Y2G0 817 aa13.26□□□□□ -0.29
SMG7-214ENST00000508461 FZD9O00144 591 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 TSPAN1O60635 241 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 ENO3P13929 434 aaPredicted RBP13.25□□□□□ -0.29
SMG7-214ENST00000508461 ACVR2BQ13705 512 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 CRYMQ14894 314 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 TCHHL1Q5QJ38 904 aaPredicted RBP13.25□□□□□ -0.29
SMG7-214ENST00000508461 RNF139Q8WU17 664 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 ZNF112Q9UJU3 913 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 ZMYND8Q9ULU4 1186 aaPredicted RBP13.25□□□□□ -0.29
SMG7-214ENST00000508461 PRR5-ARHGAP8B1AHC4 643 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 TYROBPO43914 113 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 RALBP11234 206 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 ACADSBP45954 432 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 SLC1A6P48664 564 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 ARHGAP8P85298 464 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 CCDC142Q17RM4 750 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 SV2CQ496J9 727 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 C9orf131Q5VYM1 1079 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 CDHR3Q6ZTQ4 885 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 PIP4K2CQ8TBX8 421 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 SCG3Q8WXD2 468 aaKnown RBP13.25□□□□□ -0.29
SMG7-214ENST00000508461 CSPG4P5Q96PW8 444 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 PGAP2Q9UHJ9 254 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 CPA4Q9UI42 421 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 GLRA3O75311 464 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 GCAP28676 217 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 SPRP35270 261 aaPredicted RBP13.25□□□□□ -0.29
SMG7-214ENST00000508461 GHRHRQ02643 423 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 OR6P1Q8NGX9 317 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 FAM136AQ96C01 138 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 MIEF2Q96C03 454 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 CADM1Q9BY67 442 aaKnown RBP13.25□□□□□ -0.29
SMG7-214ENST00000508461 VCX3BQ9H321 246 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 BATF3Q9NR55 127 aa13.25□□□□□ -0.29
SMG7-214ENST00000508461 DCXO43602 365 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 USP17L7P0C7H9 530 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 GMPRP36959 345 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 SKIV2L2P42285 1042 aaKnown RBP13.24□□□□□ -0.29
SMG7-214ENST00000508461 TRIP10Q15642 601 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 PDCD2Q16342 344 aaPredicted RBP13.24□□□□□ -0.29
SMG7-214ENST00000508461 RINLQ6ZS11 566 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 EPAS1Q99814 870 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 CAB39LQ9H9S4 337 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 XPNPEP3Q9NQH7 507 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 SAR1AQ9NR31 198 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 DDX43Q9NXZ2 648 aaKnown RBP13.24□□□□□ -0.29
SMG7-214ENST00000508461 C2CD2Q9Y426 696 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
SMG7-214ENST00000508461 MFSD11O43934 449 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 CRCPO75575 148 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 MT-CO1P00395 513 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 NDUFV1P49821 464 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 PEX6Q13608 980 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 ZNF618Q5T7W0 954 aa13.24□□□□□ -0.29
SMG7-214ENST00000508461 CTU1Q7Z7A3 348 aaKnown RBP13.24□□□□□ -0.29
SMG7-214ENST00000508461 PYDC1Q8WXC3 89 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms