RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 LAMP2P13473 410 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 FCARP24071 287 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 WEE1P30291 646 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 USP4Q13107 963 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 ZNF77Q15935 545 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 BRMS1LQ5PSV4 323 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 SYCE1Q8N0S2 351 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 SLC35F6Q8N357 371 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 TRIM58Q8NG06 486 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.6■■□□□ 1.05
HOXC9-203ENST00000508190 UNC80Q8N2C7 3258 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 GREM1O60565 184 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 MARCKSL1P49006 195 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 SMAD2Q15796 467 aaKnown RBP21.6■■□□□ 1.05
HOXC9-203ENST00000508190 ATP13A4Q4VNC1 1196 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 KCNT1Q5JUK3 1230 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 NUGGCQ68CJ6 796 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 PEX26Q7Z412 305 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 DENND1CQ8IV53 801 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 CD101Q93033 1021 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 LRRC3BQ96PB8 259 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 NCAPGQ9BPX3 1015 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 SNRNP25Q9BV90 132 aaKnown RBP21.6■■□□□ 1.05
HOXC9-203ENST00000508190 AMFRQ9UKV5 643 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 FZD10Q9ULW2 581 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 SNX10Q9Y5X0 201 aa21.6■■□□□ 1.05
HOXC9-203ENST00000508190 TCF20Q9UGU0 1960 aaKnown RBP21.59■■□□□ 1.05
HOXC9-203ENST00000508190 PAGE1O75459 146 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 SLC2A3P11169 496 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 IL9P15248 144 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 ADRA1BP35368 520 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 GGCXP38435 758 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 HARS2P49590 506 aaKnown RBP21.59■■□□□ 1.05
HOXC9-203ENST00000508190 HADHQ16836 314 aaKnown RBP21.59■■□□□ 1.05
HOXC9-203ENST00000508190 TANGO2Q6ICL3 276 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 OTOP3Q7RTS5 596 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 DDX42Q86XP3 938 aaKnown RBP eCLIP21.59■■□□□ 1.05
HOXC9-203ENST00000508190 CELF5Q8N6W0 485 aaKnown RBP21.59■■□□□ 1.05
HOXC9-203ENST00000508190 KRT35Q92764 455 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 KLHL11Q9NVR0 708 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 SH3BP1Q9Y3L3 701 aa21.59■■□□□ 1.05
HOXC9-203ENST00000508190 C2CD4DB7Z1M9 353 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 RARAP10276 462 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 CA9Q16790 459 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 NADSYN1Q6IA69 706 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 PARM1Q6UWI2 310 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 Q6ZNB5 142 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 UNC45BQ8IWX7 931 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 PYROXD2Q8N2H3 581 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 ATP6V0D2Q8N8Y2 350 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 HSPH1Q92598 858 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 NTAN1Q96AB6 310 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 PHF7Q9BWX1 381 aaPredicted RBP21.58■■□□□ 1.04
HOXC9-203ENST00000508190 KIF9Q9HAQ2 790 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 TRPV4Q9HBA0 871 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 AGO1Q9UL18 857 aaKnown RBP21.58■■□□□ 1.04
HOXC9-203ENST00000508190 AP4E1Q9UPM8 1137 aa21.58■■□□□ 1.04
HOXC9-203ENST00000508190 ZFP37Q9Y6Q3 630 aaPredicted RBP21.58■■□□□ 1.04
HOXC9-203ENST00000508190 GOLGA6L7A0A1B0GV03 622 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 TCF3P15923 654 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 DNA2P51530 1060 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 GNG11P61952 73 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 SCAPQ12770 1279 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 ARL13BQ3SXY8 428 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 ERMARDQ5T6L9 678 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 PIK3R6Q5UE93 754 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 RHOT1Q8IXI2 618 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 TDRD5Q8NAT2 981 aaKnown RBP21.57■■□□□ 1.04
HOXC9-203ENST00000508190 FGF14Q92915 247 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 BTN2A3PQ96KV6 586 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 WDR24Q96S15 920 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 KXD1Q9BQD3 176 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 SIK2Q9H0K1 926 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 ZFP14Q9HCL3 533 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 EPS15L1Q9UBC2 864 aa21.57■■□□□ 1.04
HOXC9-203ENST00000508190 LSM7Q9UK45 103 aaKnown RBP21.57■■□□□ 1.04
HOXC9-203ENST00000508190 MIA3Q5JRA6 1907 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 HEPACAM2A8MVW5 462 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 MSNP26038 577 aaKnown RBP21.56■■□□□ 1.04
HOXC9-203ENST00000508190 EFHC2Q5JST6 749 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 MEI1Q5TIA1 1274 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 HTR3DQ70Z44 454 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 BBS7Q8IWZ6 715 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 RPGRIP1Q96KN7 1286 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 C16orf45Q96MC5 204 aaPredicted RBP21.56■■□□□ 1.04
HOXC9-203ENST00000508190 PLA2G2FQ9BZM2 168 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 DCLK3Q9C098 648 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.56■■□□□ 1.04
HOXC9-203ENST00000508190 HS3ST4Q9Y661 456 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 TICRRQ7Z2Z1 1910 aa21.56■■□□□ 1.04
HOXC9-203ENST00000508190 E2F8A0AVK6 867 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 ENC1O14682 589 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 DDX3YO15523 660 aaKnown RBP21.55■■□□□ 1.04
HOXC9-203ENST00000508190 PSTPIP1O43586 416 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 ACSL4O60488 711 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 CTNNA2P26232 953 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 CTNNA1P35221 906 aaKnown RBP21.55■■□□□ 1.04
HOXC9-203ENST00000508190 BOLA3Q53S33 107 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 MS4A13Q5J8X5 152 aa21.55■■□□□ 1.04
HOXC9-203ENST00000508190 RAP1GAP2Q684P5 730 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms