RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 MRPS5P82675 430 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 CCDC15Q0P6D6 951 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 TRIM32Q13049 653 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 GDF6Q6KF10 455 aaPredicted RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 VPS52Q8N1B4 723 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 NME8Q8N427 588 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 PDCD7Q8N8D1 485 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 EDEM1Q92611 657 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 GRAMD1AQ96CP6 724 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 TNIP3Q96KP6 325 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 ZIC5Q96T25 663 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 LRRC4Q9HBW1 653 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 NMRK2Q9NPI5 230 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 FZD10Q9ULW2 581 aa14.98□□□□□ -0.01
DDX41-208ENST00000507955 PDCD11Q14690 1871 aaKnown RBP14.98□□□□□ -0.01
DDX41-208ENST00000507955 UNCXA6NJT0 531 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 KCNK1O00180 336 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 NDC80O14777 642 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 USP17L7P0C7H9 530 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 T-ENOLP0DO92 83 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 SKIV2L2P42285 1042 aaKnown RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 RPL34P49207 117 aaKnown RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 SCNN1GP51170 649 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 NBPF20Q3BBV1 942 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 SLC25A52Q3SY17 297 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 LIMS2Q7Z4I7 341 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 RFWD2Q8NHY2 731 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 SLC7A14Q8TBB6 771 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 DEPDC1BQ8WUY9 529 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 USP6NLQ92738 828 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 MIEF2Q96C03 454 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 SIGLEC10Q96LC7 697 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 HNRNPABQ99729 332 aaKnown RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 ULBP1Q9BZM6 244 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 AGO3Q9H9G7 860 aaKnown RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 HAO1Q9UJM8 370 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 F8W810 466 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 CHRNA1P02708 482 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 DESP17661 470 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 CCND1P24385 295 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 CDC25CP30307 473 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 GMPRP36959 345 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 PNPLA4P41247 253 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 ANKRD20A2Q5SQ80 823 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 MROH9Q5TGP6 573 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 ANKRD20A1Q5TYW2 823 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 ANKRD20A3Q5VUR7 823 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 CASC4Q6P4E1 433 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 CES3Q6UWW8 571 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 SH2D5Q6ZV89 423 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 C10orf82Q8WW14 230 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 HTR3CQ8WXA8 447 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 PCED1BQ96HM7 432 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 HSFY1Q96LI6 401 aa14.97□□□□□ -0.01
DDX41-208ENST00000507955 ZNF395Q9H8N7 513 aaPredicted RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 NOP53Q9NZM5 478 aaKnown RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 NKX1-2Q9UD57 310 aaPredicted RBP14.97□□□□□ -0.01
DDX41-208ENST00000507955 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 WDR27A2RRH5 827 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 BGNP21810 368 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 ARL4AP40617 200 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 SNX16P57768 344 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 SESN2P58004 480 aaPredicted RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 RASA2Q15283 850 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 EFHC1Q5JVL4 640 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 C17orf99Q6UX52 265 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 RASAL3Q86YV0 1011 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 CDKL3Q8IVW4 592 aaPredicted RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 SIX6OS1Q8N1H7 587 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 RNF139Q8WU17 664 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 SMOQ99835 787 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 FAM105AQ9NUU6 356 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 NUP205Q92621 2012 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 XPOTO43592 962 aaKnown RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 USP12O75317 370 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 ZWINTO95229 277 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 POMCP01189 267 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 GM2AP17900 193 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 WARSP23381 471 aaKnown RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 ZNF449Q6P9G9 518 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 RGS9BPQ6ZS82 235 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 COLGALT1Q8NBJ5 622 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 ZMIZ2Q8NF64 920 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 TFB1MQ8WVM0 346 aaKnown RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 SLC7A6OSQ96CW6 309 aaPredicted RBP14.96□□□□□ -0.01
DDX41-208ENST00000507955 QKIQ96PU8 341 aaKnown RBP eCLIP14.96□□□□□ -0.01
DDX41-208ENST00000507955 PHACTR1Q9C0D0 580 aa14.96□□□□□ -0.01
DDX41-208ENST00000507955 IQANK1A0A1B0GTG1 560 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 HMX2A2RU54 273 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 GCATO75600 419 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 AP1G2O75843 785 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 ACADSBP45954 432 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 SLC18A1P54219 525 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 IRX4P78413 519 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 SLC26A11Q86WA9 606 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 P2RY11Q96G91 374 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 AGAP3Q96P47 875 aa14.96□□□□□ -0.02
DDX41-208ENST00000507955 LRMDAQ9H2I8 198 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms