RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 EIF2B3Q9NR50 452 aaKnown RBP18.25■□□□□ 0.51
SFXN1-208ENST00000507823 TMEM189-UBE2V1I3L0A0 370 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 TRDMT1O14717 391 aaKnown RBP18.24■□□□□ 0.51
SFXN1-208ENST00000507823 PRKCHP24723 683 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 MAGEA9P43362 315 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 CXCR3P49682 368 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 DSC1Q08554 894 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 EIF4EBP2Q13542 120 aaPredicted RBP18.24■□□□□ 0.51
SFXN1-208ENST00000507823 PDK1Q15118 436 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 RTN4RL1Q86UN2 441 aaPredicted RBP18.24■□□□□ 0.51
SFXN1-208ENST00000507823 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 SLC7A14Q8TBB6 771 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 MGARPQ8TDB4 240 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 DYDC1Q8WWB3 177 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 CABS1Q96KC9 395 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 XAB2Q9HCS7 855 aaKnown RBP18.24■□□□□ 0.51
SFXN1-208ENST00000507823 DMAP1Q9NPF5 467 aaPredicted RBP18.24■□□□□ 0.51
SFXN1-208ENST00000507823 ANLNQ9NQW6 1124 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 TMPRSS4Q9NRS4 437 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 TMLHEQ9NVH6 421 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 PCDHB8Q9UN66 801 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 NOD1Q9Y239 953 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 TTLL3Q9Y4R7 772 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 I3L4J1 428 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 CAPN9O14815 690 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 AOC2O75106 756 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 KIAA0754O94854 1291 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 KRT15P19012 456 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 STX2P32856 288 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 IFT88Q13099 833 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 SIGLEC10Q96LC7 697 aa18.24■□□□□ 0.51
SFXN1-208ENST00000507823 SNX3O60493 162 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 OPHN1O60890 802 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 IGLV3-25P01717 112 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 APRTP07741 180 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 VIMP08670 466 aaKnown RBP18.23■□□□□ 0.51
SFXN1-208ENST00000507823 MLNP12872 115 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 MSH2P43246 934 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 RABGGTBP53611 331 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 NME3Q13232 169 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 MBTPS1Q14703 1052 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 ANKRD20A2Q5SQ80 823 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 FAXCQ5TGI0 409 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 ANKRD20A1Q5TYW2 823 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 ANKRD20A3Q5VUR7 823 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 LRRTM3Q86VH5 581 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 TRIM62Q9BVG3 475 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 TCP11X1B4DZS4 312 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 EEF2KO00418 725 aaKnown RBP18.23■□□□□ 0.51
SFXN1-208ENST00000507823 AVILO75366 819 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 IL9RQ01113 521 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 LACTB2Q53H82 288 aaPredicted RBP18.23■□□□□ 0.51
SFXN1-208ENST00000507823 OVOS1Q6IE37 1185 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 CYS1Q717R9 158 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 ALKBH8Q96BT7 664 aaKnown RBP18.23■□□□□ 0.51
SFXN1-208ENST00000507823 COLEC11Q9BWP8 271 aa18.23■□□□□ 0.51
SFXN1-208ENST00000507823 A0A1W2PPM1 405 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 NCAM1P13591 858 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 TAC1P20366 129 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 PAXIP1Q6ZW49 1069 aaPredicted RBP18.22■□□□□ 0.51
SFXN1-208ENST00000507823 SLC24A5Q71RS6 500 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 THEM5Q8N1Q8 247 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 OTUD6BQ8N6M0 293 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 LRRN4Q8WUT4 740 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 LINC01599Q8WXQ3 324 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 GLT1D1Q96MS3 346 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 RHOBTB2Q9BYZ6 727 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 KIF9Q9HAQ2 790 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 SAMD15Q9P1V8 674 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 ZNF180Q9UJW8 692 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 ANKRD65E5RJM6 399 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 FAM72CH0Y354 149 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 PPP1R12AO14974 1030 aaPredicted RBP18.22■□□□□ 0.51
SFXN1-208ENST00000507823 ITGB1P05556 798 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 BDNFP23560 247 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 FAM72AQ5TYM5 149 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 FAM72DQ6L9T8 149 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 SH2D5Q6ZV89 423 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 FAM72BQ86X60 149 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 CCT6BQ92526 530 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 P2RY11Q96G91 374 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 LGMNQ99538 433 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 BRD8Q9H0E9 1235 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 IGSF9Q9P2J2 1179 aa18.22■□□□□ 0.51
SFXN1-208ENST00000507823 FSBPO95073 299 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 CPP00450 1065 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 GNRH1P01148 92 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 AMHP03971 560 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 MYCNP04198 464 aaPredicted RBP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 WASHC5Q12768 1159 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 SPARCL1Q14515 664 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 ARL13BQ3SXY8 428 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 KBTBD12Q3ZCT8 623 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 LHX8Q68G74 356 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 EBNA1BP2Q99848 306 aaKnown RBP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 KDM4CQ9H3R0 1056 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 DDIT4Q9NX09 232 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 ZC3H7BQ9UGR2 993 aaKnown RBP18.21■□□□□ 0.51
SFXN1-208ENST00000507823 INPP5FQ9Y2H2 1132 aa18.21■□□□□ 0.51
SFXN1-208ENST00000507823 GOLGA6L7A0A1B0GV03 622 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms