RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 HES6Q96HZ4 224 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 NCAPGQ9BPX3 1015 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 TLR10Q9BXR5 811 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 TKTL2Q9H0I9 626 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 CDH7Q9ULB5 785 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 FZD10Q9ULW2 581 aa14.73□□□□□ -0.05
RNF4-208ENST00000507247 LEFTY2O00292 366 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 ENC1O14682 589 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 PSTPIP1O43586 416 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 MOCS2O96007 188 aaPredicted RBP14.72□□□□□ -0.05
RNF4-208ENST00000507247 KLKB1P03952 638 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 RARAP10276 462 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 CTNNA1P35221 906 aaKnown RBP14.72□□□□□ -0.05
RNF4-208ENST00000507247 ADRA1BP35368 520 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 KPNA1P52294 538 aaPredicted RBP14.72□□□□□ -0.05
RNF4-208ENST00000507247 ETF1P62495 437 aaKnown RBP14.72□□□□□ -0.05
RNF4-208ENST00000507247 USP4Q13107 963 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 KCNT1Q5JUK3 1230 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 FAM78AQ5JUQ0 283 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 LRRC38Q5VT99 294 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 RHOT1Q8IXI2 618 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 SH3RF2Q8TEC5 729 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 ALG3Q92685 438 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 RSPRY1Q96DX4 576 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 ASB16Q96NS5 453 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 NECTIN4Q96NY8 510 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 TDP1Q9NUW8 608 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 KLHL11Q9NVR0 708 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.72□□□□□ -0.05
RNF4-208ENST00000507247 GDE1Q9NZC3 331 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 CFAP97Q9P2B7 532 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 AP4E1Q9UPM8 1137 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 SNX10Q9Y5X0 201 aa14.72□□□□□ -0.05
RNF4-208ENST00000507247 SPTBN5Q9NRC6 3674 aaKnown RBP14.71□□□□□ -0.05
RNF4-208ENST00000507247 SCAMP3O14828 347 aaKnown RBP14.71□□□□□ -0.05
RNF4-208ENST00000507247 PAGE1O75459 146 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 APOEP02649 317 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 ATP1A1P05023 1023 aaKnown RBP14.71□□□□□ -0.05
RNF4-208ENST00000507247 SLC2A3P11169 496 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 WEE1P30291 646 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 CORO1AP31146 461 aaKnown RBP14.71□□□□□ -0.05
RNF4-208ENST00000507247 GBP2P32456 591 aaPredicted RBP14.71□□□□□ -0.05
RNF4-208ENST00000507247 GGCXP38435 758 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 PEX5P50542 639 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 DNA2P51530 1060 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 SCAPQ12770 1279 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 ZNF77Q15935 545 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 ERMARDQ5T6L9 678 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 NUGGCQ68CJ6 796 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 NADSYN1Q6IA69 706 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 SYT10Q6XYQ8 523 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 Q6ZNB5 142 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 POLNQ7Z5Q5 900 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 PYROXD2Q8N2H3 581 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 ATP6V0D2Q8N8Y2 350 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 ST13P5Q8NFI4 369 aaPredicted RBP14.71□□□□□ -0.05
RNF4-208ENST00000507247 TEKT4Q8WW24 435 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 HSPH1Q92598 858 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 DNAI1Q9UI46 699 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 JRKLQ9Y4A0 524 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 PCDHA3Q9Y5H8 950 aa14.71□□□□□ -0.05
RNF4-208ENST00000507247 DOCK4Q8N1I0 1966 aa14.71□□□□□ -0.06
RNF4-208ENST00000507247 CCDC66A2RUB6 948 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 MIF4GDA9UHW6 222 aaKnown RBP14.7□□□□□ -0.06
RNF4-208ENST00000507247 ZNF500O60304 480 aaPredicted RBP14.7□□□□□ -0.06
RNF4-208ENST00000507247 KRT7P08729 469 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 TCF3P15923 654 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 SP100P23497 879 aaPredicted RBP14.7□□□□□ -0.06
RNF4-208ENST00000507247 FCARP24071 287 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 VIPR2P41587 438 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 ARSEP51690 589 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 AIF1P55008 147 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 RPS6KA1Q15418 735 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 ARL13BQ3SXY8 428 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 LEXMQ3ZCV2 418 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 BOLA3Q53S33 107 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 ARTNQ5T4W7 220 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 PIK3R6Q5UE93 754 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 DCAF12L1Q5VU92 463 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 DENND1CQ8IV53 801 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 UNC45BQ8IWX7 931 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 TTC16Q8NEE8 873 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 RAPGEF5Q92565 580 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 SMARCD2Q92925 531 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 BTN2A3PQ96KV6 586 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 LRRC3BQ96PB8 259 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 KCTD15Q96SI1 283 aaPredicted RBP14.7□□□□□ -0.06
RNF4-208ENST00000507247 DHX35Q9H5Z1 703 aaKnown RBP14.7□□□□□ -0.06
RNF4-208ENST00000507247 TRPV4Q9HBA0 871 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.7□□□□□ -0.06
RNF4-208ENST00000507247 TMEM51Q9NW97 253 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 AGO1Q9UL18 857 aaKnown RBP14.7□□□□□ -0.06
RNF4-208ENST00000507247 SH3BP1Q9Y3L3 701 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 HS3ST4Q9Y661 456 aa14.7□□□□□ -0.06
RNF4-208ENST00000507247 GOLGA6L7A0A1B0GV03 622 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 PI4K2BG5E9Z4 385 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 FAM72CH0Y354 149 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 ACSL4O60488 711 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 KRT1P04264 644 aa14.69□□□□□ -0.06
RNF4-208ENST00000507247 CD48P09326 243 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms