RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 UBP1Q9NZI7 540 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 GPR32O75388 356 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 RNASEH2AO75792 299 aaKnown RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 SLCO1A2P46721 670 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 PSMD8P48556 350 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 NPY5RQ15761 445 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 E2F7Q96AV8 911 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 TELO2Q9Y4R8 837 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 HGSO14964 777 aaPredicted RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 PROSCO94903 275 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 CAP1Q01518 475 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 UBE3AQ05086 875 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 FAXCQ5TGI0 409 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 ZNF461Q8TAF7 563 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 FUBP3Q96I24 572 aaKnown RBP eCLIP9.72□□□□□ -0.85
NEK1-203ENST00000507142 TBCBQ99426 244 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 NTPCRQ9BSD7 190 aaKnown RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 CNTN3Q9P232 1028 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 VPS18Q9P253 973 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 SUN2Q9UH99 717 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 KRT38O76015 456 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 CFIP05156 583 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 MSH3P20585 1137 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 RGS4P49798 205 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 DNAAF5Q86Y56 855 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 C12orf50Q8NA57 414 aaPredicted RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 BPIFB1Q8TDL5 484 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 SNF8Q96H20 258 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 ADAMTS10Q9H324 1103 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 C20orf96Q9NUD7 363 aaPredicted RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 INTUQ9ULD6 942 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 MGEA5O60502 916 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 CILPO75339 1184 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 CRTAMO95727 393 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 C4BPAP04003 597 aaKnown RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 ATP4AP20648 1035 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 TIE1P35590 1138 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 DAB2P98082 770 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 USP45Q70EL2 814 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 HMGB4Q8WW32 186 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 NDRG1Q92597 394 aaKnown RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 APOL2Q9BQE5 337 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 SPATA16Q9BXB7 569 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 NCDNQ9UBB6 729 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 XPO7Q9UIA9 1087 aaKnown RBP9.72□□□□□ -0.85
NEK1-203ENST00000507142 CA14Q9ULX7 337 aa9.72□□□□□ -0.85
NEK1-203ENST00000507142 NVLO15381 856 aaKnown RBP9.71□□□□□ -0.85
NEK1-203ENST00000507142 FGF10O15520 208 aaPredicted RBP9.71□□□□□ -0.85
NEK1-203ENST00000507142 ATG13O75143 517 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 CAV1Q03135 178 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 SF3A3Q12874 501 aaKnown RBP eCLIP9.71□□□□□ -0.856e-9■■■■■ 59.3
NEK1-203ENST00000507142 C3orf20Q8ND61 904 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 ZSCAN18Q8TBC5 510 aaPredicted RBP9.71□□□□□ -0.85
NEK1-203ENST00000507142 HERVK_113Q902F9 699 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 SPATA6Q9NWH7 488 aaPredicted RBP9.71□□□□□ -0.85
NEK1-203ENST00000507142 AIPL1Q9NZN9 384 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 CACNA1SQ13698 1873 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 ANO9A1A5B4 782 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 HEATR9A2RTY3 570 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 DDX6P26196 483 aaKnown RBP eCLIP9.71□□□□□ -0.85
NEK1-203ENST00000507142 HTR1BP28222 390 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 MMP13P45452 471 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 STAT4Q14765 748 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 IMPG1Q17R60 797 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 MFSD4BQ5TF39 518 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 TXNDC8Q6A555 127 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 PHLDB3Q6NSJ2 640 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 CALML6Q8TD86 181 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 PLAGL2Q9UPG8 496 aa9.71□□□□□ -0.85
NEK1-203ENST00000507142 IFRD1O00458 451 aaPredicted RBP9.71□□□□□ -0.86
NEK1-203ENST00000507142 MTA2O94776 668 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 TEAD4Q15561 434 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 TFDP3Q5H9I0 405 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
NEK1-203ENST00000507142 CDCA2Q69YH5 1023 aaPredicted RBP9.71□□□□□ -0.86
NEK1-203ENST00000507142 RFWD3Q6PCD5 774 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 AGMOQ6ZNB7 445 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 FAM43BQ6ZT52 329 aaPredicted RBP9.71□□□□□ -0.86
NEK1-203ENST00000507142 MARK2Q7KZI7 788 aaKnown RBP9.71□□□□□ -0.86
NEK1-203ENST00000507142 ANKMY2Q8IV38 441 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 KLHDC9Q8NEP7 349 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 OR14C36Q8NHC7 312 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 VCPIP1Q96JH7 1222 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 ELMO2Q96JJ3 720 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 KCNK16Q96T55 309 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 CEP41Q9BYV8 373 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 RHOBTB2Q9BYZ6 727 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 DAB1O75553 588 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 HADHAP40939 763 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 PLEKHG4Q58EX7 1191 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 TBC1D1Q86TI0 1168 aaPredicted RBP9.71□□□□□ -0.86
NEK1-203ENST00000507142 SLC22A17Q8WUG5 538 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 SPATA17Q96L03 361 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 PKD2L2Q9NZM6 624 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 CCDC88AQ3V6T2 1871 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 MYH3P11055 1940 aa9.71□□□□□ -0.86
NEK1-203ENST00000507142 RFXAPO00287 272 aa9.7□□□□□ -0.86
NEK1-203ENST00000507142 FSBPO95073 299 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms