RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 E2F5Q15329 346 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 FYB2Q5VWT5 728 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 ITIH6Q6UXX5 1313 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 MMS22LQ6ZRQ5 1243 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 SND1Q7KZF4 910 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNCA-209ENST00000506244 TRMT11Q7Z4G4 463 aaKnown RBP17.34■□□□□ 0.37
SNCA-209ENST00000506244 PHTF2Q8N3S3 785 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 ATP6V0D2Q8N8Y2 350 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 RPLP0P6Q8NHW5 317 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 KCNV2Q8TDN2 545 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 BHMTQ93088 406 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 BTN2A3PQ96KV6 586 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 C11orf70Q9BRQ4 267 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 SLC2A11Q9BYW1 496 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNCA-209ENST00000506244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.34■□□□□ 0.37
SNCA-209ENST00000506244 MYOFQ9NZM1 2061 aa17.34■□□□□ 0.37
SNCA-209ENST00000506244 A0A0A0MRY4 1105 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 GOLGA8SH3BPF8 625 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 MOCS2O96007 188 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 UNGP13051 313 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 ABCB4P21439 1286 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 GSCP56915 257 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 SATB1Q01826 763 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 C10orf76Q5T2E6 689 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 ARCQ7LC44 396 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 PHF13Q86YI8 300 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 MAML2Q8IZL2 1156 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 HJURPQ8NCD3 748 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 RNF214Q8ND24 703 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 EZH1Q92800 747 aaPredicted RBP17.33■□□□□ 0.36
SNCA-209ENST00000506244 RNF34Q969K3 372 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 PLK2Q9NYY3 685 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 AIPL1Q9NZN9 384 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 ADAM22Q9P0K1 906 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 SLC8A2Q9UPR5 921 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 SLC27A6Q9Y2P4 619 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 PCDHGA2Q9Y5H1 932 aa17.33■□□□□ 0.36
SNCA-209ENST00000506244 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.36
SNCA-209ENST00000506244 CACNA1IQ9P0X4 2223 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 SYNJ2BP-COX16A0A087WUM0 186 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 K7EQS6 105 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 F9P00740 461 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 TNFAIP3P21580 790 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 PRKCIP41743 596 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 SULT1E1P49888 294 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 SEC13P55735 322 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 RNASE9P60153 205 aaKnown RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 C1QBPQ07021 282 aaKnown RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 KLHL30Q0D2K2 578 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 TRIM14Q14142 442 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 ZC3H12AQ5D1E8 599 aaKnown RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 MPP7Q5T2T1 576 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 SYT13Q7L8C5 426 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 IRF2BP2Q7Z5L9 587 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 ANKS1BQ7Z6G8 1248 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 CCDC117Q8IWD4 279 aaPredicted RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 SLC30A5Q8TAD4 765 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 USP33Q8TEY7 942 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 SYN2Q92777 582 aaPredicted RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 TMA16Q96EY4 203 aaKnown RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 XPO4Q9C0E2 1151 aaKnown RBP17.32■□□□□ 0.36
SNCA-209ENST00000506244 ZSCAN32Q9NX65 697 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 COX16Q9P0S2 106 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 WDFY4Q6ZS81 3184 aa17.32■□□□□ 0.36
SNCA-209ENST00000506244 ANKRD62A6NC57 917 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 M0QYT0 321 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 GFRA2O00451 464 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 HOXD9P28356 352 aaPredicted RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 HOXA6P31267 233 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 NBL1P41271 181 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 ZBED6P86452 979 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 NME3Q13232 169 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 EIF4EBP2Q13542 120 aaPredicted RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 SLC25A52Q3SY17 297 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 C2orf27AQ580R0 203 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 FAM133BQ5BKY9 247 aaKnown RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 EOGTQ5NDL2 527 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 ACBD5Q5T8D3 534 aaPredicted RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 MON1BQ7L1V2 547 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 VPS36Q86VN1 386 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 CHSY1Q86X52 802 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 C3orf20Q8ND61 904 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 ATRIPQ8WXE1 791 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 PGAP3Q96FM1 320 aaPredicted RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 PCDHB18PQ96TA0 734 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 NPY6RQ99463 290 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 SEMA4AQ9H3S1 761 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 METTL5Q9NRN9 209 aaKnown RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 FBXO10Q9UK96 956 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 MMP17Q9ULZ9 603 aa17.31■□□□□ 0.36
SNCA-209ENST00000506244 LUC7L2Q9Y383 392 aaKnown RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 BZW2Q9Y6E2 419 aaKnown RBP17.31■□□□□ 0.36
SNCA-209ENST00000506244 KCNU1A8MYU2 1149 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 F5H5T6 163 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 TSPAN3O60637 253 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 TPM1P09493 284 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 DESP17661 470 aa17.3■□□□□ 0.36
SNCA-209ENST00000506244 PITX1P78337 314 aaPredicted RBP17.3■□□□□ 0.36
SNCA-209ENST00000506244 DMC1Q14565 340 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms