RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 E7ENQ6 273 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 TRIM24O15164 1050 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 SYNCRIPO60506 623 aaKnown RBP10.87□□□□□ -0.67
NR1I3-222ENST00000506018 NDUFS2O75306 463 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 LTFP02788 710 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 PRKCSHP14314 528 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-222ENST00000506018 GABRG2P18507 467 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 BCKDHBP21953 392 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 HOXD12P35452 270 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 SLC11A2P49281 568 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 RGS7P49802 495 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 RPL6Q02878 288 aaKnown RBP10.87□□□□□ -0.67
NR1I3-222ENST00000506018 LMAN2Q12907 356 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 MEA1Q16626 185 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 MAP7D1Q3KQU3 841 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 ADGRF1Q5T601 910 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 PMF1Q6P1K2 205 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 SYT12Q8IV01 421 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 FAM217AQ8IXS0 508 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 MLKLQ8NB16 471 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 LMO3Q8TAP4 145 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 CEP76Q8TAP6 659 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 RLN3Q8WXF3 142 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 TFAP2BQ92481 460 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 PIGKQ92643 395 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 TMA16Q96EY4 203 aaKnown RBP10.87□□□□□ -0.67
NR1I3-222ENST00000506018 SERPINB11Q96P15 392 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 NAT10Q9H0A0 1025 aaKnown RBP10.87□□□□□ -0.67
NR1I3-222ENST00000506018 UBE2TQ9NPD8 197 aaPredicted RBP10.87□□□□□ -0.67
NR1I3-222ENST00000506018 ST7Q9NRC1 585 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 ANO10Q9NW15 660 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 CACNA2D2Q9NY47 1150 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 CALCOCO1Q9P1Z2 691 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 SFMBT1Q9UHJ3 866 aa10.87□□□□□ -0.67
NR1I3-222ENST00000506018 CKAP5Q14008 2032 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 ANTXRLA6NF34 631 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 CAPN9O14815 690 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 IRAK2O43187 625 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 MTIF2P46199 727 aaKnown RBP10.86□□□□□ -0.67
NR1I3-222ENST00000506018 SNX16P57768 344 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 RING1Q06587 406 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 STX1AQ16623 288 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 CT47A1Q5JQC4 288 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-222ENST00000506018 SMYD5Q6GMV2 418 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 MSANTD2Q6P1R3 559 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 KIAA1324Q6UXG2 1013 aaKnown RBP10.86□□□□□ -0.67
NR1I3-222ENST00000506018 GBP6Q6ZN66 633 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 ARHGEF19Q8IW93 802 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 TMEFF1Q8IYR6 380 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 WFIKKN2Q8TEU8 576 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 NDRG1Q92597 394 aaKnown RBP10.86□□□□□ -0.67
NR1I3-222ENST00000506018 KAT5Q92993 513 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 FAM149B1Q96BN6 582 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 CIPCQ9C0C6 399 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 SMOC1Q9H4F8 434 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 TMEM9BQ9NQ34 198 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 ELOVL2Q9NXB9 296 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 EVLQ9UI08 416 aaPredicted RBP10.86□□□□□ -0.67
NR1I3-222ENST00000506018 PLA2G4CQ9UP65 541 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 STON1Q9Y6Q2 735 aa10.86□□□□□ -0.67
NR1I3-222ENST00000506018 A0A1W2PQF6 199 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 GTPBP10A4D1E9 387 aaKnown RBP10.85□□□□□ -0.67
NR1I3-222ENST00000506018 RNF225M0QZC1 329 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-222ENST00000506018 PIK3R2O00459 728 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 THAP12O43422 761 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 ADRB1P08588 477 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 ACADMP11310 421 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 NCAM1P13591 858 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 NDUFV2P19404 249 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 GNA15P30679 374 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 ATXN3P54252 364 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-222ENST00000506018 TBX4P57082 545 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 EXOC3L4Q17RC7 722 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 GEN1Q17RS7 908 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 TRIM61Q5EBN2 209 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 MPP7Q5T2T1 576 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 SYCP2LQ5T4T6 812 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 TCEAL6Q6IPX3 200 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 TRIM65Q6PJ69 517 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 LRSAM1Q6UWE0 723 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 SERPINA13PQ6UXR4 307 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 ARMCX6Q7L4S7 300 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 BHLHA9Q7RTU4 235 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 AHI1Q8N157 1196 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 STK32AQ8WU08 396 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 FOXJ1Q92949 421 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 TCEAL3Q969E4 200 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 PIWIL1Q96J94 861 aaKnown RBP10.85□□□□□ -0.67
NR1I3-222ENST00000506018 NOX5Q96PH1 765 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 MED15Q96RN5 788 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 ACOX2Q99424 681 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 MIS12Q9H081 205 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 PRDM16Q9HAZ2 1276 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 THAP10Q9P2Z0 257 aaPredicted RBP10.85□□□□□ -0.67
NR1I3-222ENST00000506018 APEX2Q9UBZ4 518 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 SUSD2Q9UGT4 822 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 STOML2Q9UJZ1 356 aa10.85□□□□□ -0.67
NR1I3-222ENST00000506018 CNTN6Q9UQ52 1028 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms