RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 TBC1D3DA0A087WVF3 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3IA0A087WXS9 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3EA0A087X179 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3KA0A087X1G2 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 CENPVL1A0A0U1RR11 272 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3BA6NDS4 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3FA6NER0 549 aaPredicted RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3LB9A6J9 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 M0QYT0 321 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 SEPT4O43236 478 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 PROM1O43490 865 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 DLDP09622 509 aaKnown RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3HP0C7X1 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 NR2F6P10588 404 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 ATP1A3P13637 1013 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 MMP8P22894 467 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 ADRA1DP25100 572 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 CCR5P51681 352 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 KCNJ12Q14500 433 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 AAK1Q2M2I8 961 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 LRCH2Q5VUJ6 765 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 ATG16L1Q676U5 607 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3GQ6DHY5 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3CQ6IPX1 549 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 PCGF5Q86SE9 256 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 ARHGEF19Q8IW93 802 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TBC1D3Q8IZP1 549 aaPredicted RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 PROKR1Q8TCW9 393 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 HDAC2Q92769 488 aaKnown RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 RRP36Q96EU6 259 aaKnown RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 NAF1Q96HR8 494 aaKnown RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 RBM17Q96I25 401 aaKnown RBP6.67□□□□□ -1.34
CHD1-204ENST00000505982 PBKQ96KB5 322 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 Q96MF0 132 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 JMJD4Q9H9V9 463 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 TMEM160Q9NX00 188 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 MGAT4CQ9UBM8 478 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 DKK2Q9UBU2 259 aa6.67□□□□□ -1.34
CHD1-204ENST00000505982 LOC105369274A0A096LPK9 316 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 LOC102723532A0A0G2JNH3 316 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 GXYLT2A0PJZ3 443 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 FAM90A20PA6NIJ5 464 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 SPRY2O43597 315 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 TMPRSS11DO60235 418 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 TSPAN3O60637 253 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 CNPP09543 421 aaKnown RBP6.66□□□□□ -1.34
CHD1-204ENST00000505982 HNRNPA1P09651 372 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHD1-204ENST00000505982 MAN1A1P33908 653 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 MCM5P33992 734 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 GRK5P34947 590 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 TXNL4AP83876 142 aaKnown RBP6.66□□□□□ -1.34
CHD1-204ENST00000505982 CYP1B1Q16678 543 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 PLAC9Q5JTB6 97 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 HYIQ5T013 277 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 DENND2CQ68D51 928 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 BBS12Q6ZW61 710 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 OR4N4Q8N0Y3 316 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 ANKRD44Q8N8A2 993 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHD1-204ENST00000505982 TFAP2BQ92481 460 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 STAMQ92783 540 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 ZNF764Q96H86 408 aaPredicted RBP6.66□□□□□ -1.34
CHD1-204ENST00000505982 REEP2Q9BRK0 252 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 RMI1Q9H9A7 625 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 SNX15Q9NRS6 342 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 SWAP70Q9UH65 585 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 ASAP1Q9ULH1 1129 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 VPS4AQ9UN37 437 aa6.66□□□□□ -1.34
CHD1-204ENST00000505982 AGAP5A6NIR3 686 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 VWC2LB2RUY7 222 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 IFIT1P09914 478 aaKnown RBP6.65□□□□□ -1.34
CHD1-204ENST00000505982 PEPDP12955 493 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 BDNFP23560 247 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 IGHMBP2P38935 993 aaKnown RBP6.65□□□□□ -1.34
CHD1-204ENST00000505982 PCP4P48539 62 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 RBM6P78332 1123 aaKnown RBP6.65□□□□□ -1.34
CHD1-204ENST00000505982 DEUP1Q05D60 604 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 PTPRRQ15256 657 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 TXNRD1Q16881 649 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 LRRC24Q50LG9 513 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 ZNF484Q5JVG2 852 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 ABHD17BQ5VST6 288 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 PTCHD4Q6ZW05 846 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 PRIMA1Q86XR5 153 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 FAM71DQ8N9W8 422 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 USP38Q8NB14 1042 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 NPIPB3Q92617 1050 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 KTI12Q96EK9 354 aaPredicted RBP6.65□□□□□ -1.34
CHD1-204ENST00000505982 PIGSQ96S52 555 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 MLST8Q9BVC4 326 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 CINPQ9BW66 212 aaPredicted RBP6.65□□□□□ -1.34
CHD1-204ENST00000505982 WDR11Q9BZH6 1224 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 PLEKHA2Q9HB19 425 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 USP29Q9HBJ7 922 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 ARHGEF3Q9NR81 526 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 AMFRQ9UKV5 643 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 SLC12A4Q9UP95 1085 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 PCDHA10Q9Y5I2 948 aa6.65□□□□□ -1.34
CHD1-204ENST00000505982 CCDC187A0A096LP49 1063 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms