RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 UPK3BL1B0FP48 263 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 UPK3BL2E5RIL1 263 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 ARHGAP33O14559 1287 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 TSPAN3O60637 253 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 GNA14O95837 355 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 ACADMP11310 421 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 CD44P16070 742 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 ZNF234Q14588 700 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 KLHL10Q6JEL2 608 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 TTI2Q6NXR4 508 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 SERPINA13PQ6UXR4 307 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 TMPRSS6Q8IU80 811 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 UNC45BQ8IWX7 931 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 ZNF557Q8N988 423 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 EHBP1Q8NDI1 1231 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 DEFB124Q8NES8 71 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 CADM4Q8NFZ8 388 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 NELFBQ8WX92 580 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 TFAP2BQ92481 460 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 TOE1Q96GM8 510 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 HSFY1Q96LI6 401 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 IRX2Q9BZI1 471 aaPredicted RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 USP36Q9P275 1121 aaKnown RBP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 CLEC4EQ9ULY5 219 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 PLA2G4CQ9UP65 541 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 SDK1Q7Z5N4 2213 aa12.58□□□□□ -0.4
PDLIM7-214ENST00000505746 PPP1R3GB7ZBB8 358 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 M0QYV0 167 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 RNF225M0QZC1 329 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 OPHN1O60890 802 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 FBXO21O94952 628 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 EPHX1P07099 455 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 NCAM1P13591 858 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 HOXD9P28356 352 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 SLC11A2P49281 568 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 RGS7P49802 495 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 GCNT1Q02742 428 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 FOXC1Q12948 553 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 SEMA3BQ13214 749 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 MORC3Q14149 939 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 PLEKHG6Q3KR16 790 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 MPP7Q5T2T1 576 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 NUGGCQ68CJ6 796 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 PMF1Q6P1K2 205 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 MSANTD2Q6P1R3 559 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 RRAGAQ7L523 313 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 RBBP8NLQ8NC74 664 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 LMO3Q8TAP4 145 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 WFIKKN2Q8TEU8 576 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 CD93Q9NPY3 652 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 WSB2Q9NYS7 404 aaPredicted RBP12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 NFE2L3Q9Y4A8 694 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 SPAG17Q6Q759 2223 aa12.57□□□□□ -0.4
PDLIM7-214ENST00000505746 MEI4A8MW99 385 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 PIK3R2O00459 728 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 IRAK2O43187 625 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 MSI1O43347 362 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 KRT37O76014 449 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 FGFR1OPO95684 399 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 LTFP02788 710 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 PRKCHP24723 683 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 BRD2P25440 801 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 HLA-FP30511 346 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 RDXP35241 583 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 TPMTP51580 245 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 RING1Q06587 406 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 KCNH2Q12809 1159 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 HNRNPDQ14103 355 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 TMEM215Q68D42 235 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 PIP4P1Q86T03 277 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 AHI1Q8N157 1196 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 MINDY1Q8N5J2 469 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 SORCS1Q8WY21 1168 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 DNASE2BQ8WZ79 361 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 KAT5Q92993 513 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 AZIN2Q96A70 460 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 DDX50Q9BQ39 737 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 NUP58Q9BVL2 599 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 GPR174Q9BXC1 333 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 ZDHHC5Q9C0B5 715 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 ABCB8Q9NUT2 735 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 DNAAF2Q9NVR5 837 aaKnown RBP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 CTNND2Q9UQB3 1225 aa12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDLIM7-214ENST00000505746 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 A0A1B0GTW7 788 aa12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 TYW5A2RUC4 315 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 KCNJ18B7U540 433 aa12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 SART1O43290 800 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 GABBR2O75899 941 aa12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 IGLV3-19P01714 112 aa12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
PDLIM7-214ENST00000505746 ATP5BP06576 529 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms