RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 SLC18B1Q6NT16 456 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 RINT1Q6NUQ1 792 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 PGBD2Q6P3X8 592 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 CCDC174Q6PII3 467 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 SLC2A7Q6PXP3 512 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 ZNF813Q6ZN06 617 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 GATAD2AQ86YP4 633 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 OR4N4Q8N0Y3 316 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 GALNT16Q8N428 558 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 OSR1Q8TAX0 266 aaPredicted RBP4.47□□□□□ -1.69
CHD1-203ENST00000505657 AKAP1Q92667 903 aaKnown RBP eCLIP4.47□□□□□ -1.69
CHD1-203ENST00000505657 RMDN3Q96TC7 470 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 MECRQ9BV79 373 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 KATNAL1Q9BW62 490 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 GATA5Q9BWX5 397 aaPredicted RBP4.47□□□□□ -1.69
CHD1-203ENST00000505657 AGO4Q9HCK5 861 aaKnown RBP4.47□□□□□ -1.69
CHD1-203ENST00000505657 KCNK9Q9NPC2 374 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 FBXO28Q9NVF7 368 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 LRFN1Q9P244 771 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 GRHPRQ9UBQ7 328 aa4.47□□□□□ -1.69
CHD1-203ENST00000505657 COL3A1P02461 1466 aaPredicted RBP4.47□□□□□ -1.69
CHD1-203ENST00000505657 SPATA31A1Q5TZJ5 1347 aa4.46□□□□□ -1.69
CHD1-203ENST00000505657 FAM90A18PA6NE21 464 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 FAM90A16PA6NEW6 464 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 FAM90A9PA6NNJ1 464 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 FAM90A5PA8MXJ8 464 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 BCAR3O75815 825 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 CSTBP04080 98 aaKnown RBP4.46□□□□□ -1.7
CHD1-203ENST00000505657 FAM90A15PP0C7V4 464 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 FAM90A14PP0C7W9 464 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 MMP8P22894 467 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 CERS1P27544 350 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 THBS4P35443 961 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 SERPINF1P36955 418 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 STAT6P42226 847 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 BIRC2Q13490 618 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 CNGA3Q16281 694 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 AAK1Q2M2I8 961 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 C4orf46Q504U0 113 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 MEX3CQ5U5Q3 659 aaKnown RBP4.46□□□□□ -1.7
CHD1-203ENST00000505657 ZNF626Q68DY1 528 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 MIS18BP1Q6P0N0 1132 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 NEK8Q86SG6 692 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 TRABD2AQ86V40 505 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 MYLK4Q86YV6 388 aaPredicted RBP4.46□□□□□ -1.7
CHD1-203ENST00000505657 CACNA2D3Q8IZS8 1091 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 SCAMP5Q8TAC9 235 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.46□□□□□ -1.7
CHD1-203ENST00000505657 GLMPQ8WWB7 406 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 ARPC5LQ9BPX5 153 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 TM2D2Q9BX73 214 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 NUAK2Q9H093 628 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 MLXIPQ9HAP2 919 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 PTPRHQ9HD43 1115 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 ASNSD1Q9NWL6 643 aa4.46□□□□□ -1.7
CHD1-203ENST00000505657 DNAJC9-AS1A6NH13 148 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 TP73O15350 636 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 PPP6R2O75170 966 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 VEGFAP15692 232 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 MATN1P21941 496 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 ATP5F1P24539 256 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 SSBP2P81877 361 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 BLMHQ13867 455 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 DAZAP2Q15038 168 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 SRSF7Q16629 238 aaKnown RBP eCLIP4.45□□□□□ -1.7
CHD1-203ENST00000505657 CCDC38Q502W7 563 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 FAM83BQ5T0W9 1011 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 ANKRD40Q6AI12 368 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 SULT6B1Q6IMI4 303 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 TTC30AQ86WT1 665 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 RFX6Q8HWS3 928 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 CNGA4Q8IV77 575 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 LAS2Q8IYD9 372 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 NRSN1Q8IZ57 195 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 STT3BQ8TCJ2 826 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 EID2BQ96D98 161 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 TRMT61AQ96FX7 289 aaKnown RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 RNF26Q9BY78 433 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 MAGEH1Q9H213 219 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 DACT1Q9NYF0 836 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 RAB21Q9UL25 225 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 CNTN6Q9UQ52 1028 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 LZTS1Q9Y250 596 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 B3GNT3Q9Y2A9 372 aa4.45□□□□□ -1.7
CHD1-203ENST00000505657 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 HEMK1Q9Y5R4 338 aaPredicted RBP4.45□□□□□ -1.7
CHD1-203ENST00000505657 WDR91A4D1P6 747 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 KCNU1A8MYU2 1149 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 ADAM10O14672 748 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 NKX2-8O15522 239 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 RNF8O76064 485 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 ST6GAL1P15907 406 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 KELP23276 732 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 HOXD12P35452 270 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 CHKAP35790 457 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 ZNF84P51523 738 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 RPL15P61313 204 aaKnown RBP4.44□□□□□ -1.7
CHD1-203ENST00000505657 CFHR1Q03591 330 aa4.44□□□□□ -1.7
CHD1-203ENST00000505657 KLF9Q13886 244 aaPredicted RBP4.44□□□□□ -1.7
CHD1-203ENST00000505657 EZH2Q15910 746 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms