RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 SCARA3Q6AZY7 606 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 FAM171BQ6P995 826 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 DDX42Q86XP3 938 aaKnown RBP eCLIP7.43□□□□□ -1.22
VCAN-206ENST00000505615 KRTAP1-3Q8IUG1 177 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 DIS3L2Q8IYB7 885 aaKnown RBP7.43□□□□□ -1.22
VCAN-206ENST00000505615 CACTIN-AS1Q8N1I8 211 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 ENGASEQ8NFI3 743 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 RFFLQ8WZ73 363 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 OTUB2Q96DC9 234 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 NAF1Q96HR8 494 aaKnown RBP7.43□□□□□ -1.22
VCAN-206ENST00000505615 ZNF560Q96MR9 790 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 ORAI3Q9BRQ5 295 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 ASB7Q9H672 318 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 BRMS1Q9HCU9 246 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 TM9SF3Q9HD45 589 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 OSGEPQ9NPF4 335 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 SPHK2Q9NRA0 654 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 DNAJC17Q9NVM6 304 aaKnown RBP7.43□□□□□ -1.22
VCAN-206ENST00000505615 DPP3Q9NY33 737 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 LRWD1Q9UFC0 647 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 PCDHB6Q9Y5E3 794 aa7.43□□□□□ -1.22
VCAN-206ENST00000505615 A0A1B0GTQ1 180 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 GABRDO14764 452 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 ATP2C2O75185 946 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 CISD3P0C7P0 127 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 MBL2P11226 248 aaPredicted RBP7.42□□□□□ -1.22
VCAN-206ENST00000505615 CDK4P11802 303 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 LIG4P49917 911 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 PCBP4P57723 403 aaKnown RBP7.42□□□□□ -1.22
VCAN-206ENST00000505615 MYL7Q01449 175 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 RAD51AP2Q09MP3 1159 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 ENPP2Q13822 863 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 SHBQ15464 509 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 INAVAQ3KP66 663 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 OXLD1Q5BKU9 147 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 KIAA1614Q5VZ46 1190 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 SDE2Q6IQ49 451 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 DENND5BQ6ZUT9 1274 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 SKAP1Q86WV1 359 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 GATAD2AQ86YP4 633 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 SPATA2LQ8IUW3 424 aaPredicted RBP7.42□□□□□ -1.22
VCAN-206ENST00000505615 C4orf32Q8N8J7 132 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 ZNF248Q8NDW4 579 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 CXorf38Q8TB03 319 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 SNX29Q8TEQ0 813 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 MYLPFQ96A32 169 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 BICD1Q96G01 975 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 P2RY11Q96G91 374 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 CNDP2Q96KP4 475 aaKnown RBP7.42□□□□□ -1.22
VCAN-206ENST00000505615 CEP295NLQ96MC4 621 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 MSTO1Q9BUK6 570 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 TIPINQ9BVW5 301 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 PCED1AQ9H1Q7 454 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 C6orf106Q9H6K1 298 aaPredicted RBP7.42□□□□□ -1.22
VCAN-206ENST00000505615 TMEM30AQ9NV96 361 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.42□□□□□ -1.22
VCAN-206ENST00000505615 USP3Q9Y6I4 520 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 STON1Q9Y6Q2 735 aa7.42□□□□□ -1.22
VCAN-206ENST00000505615 LRBAP50851 2863 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 FBN2P35556 2912 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 PP2D1A8MPX8 630 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 TISP43B9A030 160 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 HNRNPDLO14979 420 aaKnown RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 COCHO43405 550 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 GREM1O60565 184 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 PFKFB2O60825 505 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 CDC45O75419 566 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 LDOC1O95751 146 aaPredicted RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 BDNFP23560 247 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 OXTRP30559 389 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 POLR2BP30876 1174 aaKnown RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 PPP3CCP48454 512 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 ACOT2P49753 483 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 COPAP53621 1224 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 NOP14P78316 857 aaKnown RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 VAC14Q08AM6 782 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 TAF10Q12962 218 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 NFATC3Q12968 1075 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 ORC1Q13415 861 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 TEAD4Q15561 434 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 ZNF174Q15697 407 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 ANO4Q32M45 955 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 BROXQ5VW32 411 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 VSTM1Q6UX27 236 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 CRELD2Q6UXH1 353 aaPredicted RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 LIMS2Q7Z4I7 341 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 TMPRSS6Q8IU80 811 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 DHX40Q8IX18 779 aaKnown RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 TMEM86AQ8N2M4 240 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 DCBLD1Q8N8Z6 715 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 IGSF22Q8N9C0 903 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 EXD3Q8N9H8 876 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 C1orf127Q8N9H9 656 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 SCFD1Q8WVM8 642 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 SNX19Q92543 992 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 SIPA1Q96FS4 1042 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 FAM84AQ96KN4 292 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 ZNF578Q96N58 590 aaPredicted RBP7.41□□□□□ -1.22
VCAN-206ENST00000505615 KRTAP4-12Q9BQ66 201 aa7.41□□□□□ -1.22
VCAN-206ENST00000505615 MMTAG2Q9BU76 263 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms