RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 NAXDQ8IW45 347 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 ZC3H3Q8IXZ2 948 aaKnown RBP6.14□□□□□ -1.43
GYPB-205ENST00000505583 ZNF276Q8N554 614 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 ZNF366Q8N895 744 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 SLC4A11Q8NBS3 891 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 ADAMTS14Q8WXS8 1223 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 TAF4BQ92750 862 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 NT5C1AQ9BXI3 368 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 DUSP16Q9BY84 665 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 NIF3L1Q9GZT8 377 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 MIR1-1HGQ9H1L0 117 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 PRDM16Q9HAZ2 1276 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 PNPLA8Q9NP80 782 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 ITM2CQ9NQX7 267 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 EXOC1Q9NV70 894 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 TOR4AQ9NXH8 423 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 FAM13BQ9NYF5 915 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 CLIC5Q9NZA1 410 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 THAP10Q9P2Z0 257 aaPredicted RBP6.14□□□□□ -1.43
GYPB-205ENST00000505583 EIF2B4Q9UI10 523 aaKnown RBP6.14□□□□□ -1.43
GYPB-205ENST00000505583 RASAL2Q9UJF2 1139 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 LSM7Q9UK45 103 aaKnown RBP6.14□□□□□ -1.43
GYPB-205ENST00000505583 TRAF3IP3Q9Y228 551 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 FNDC3AQ9Y2H6 1198 aaKnown RBP6.14□□□□□ -1.43
GYPB-205ENST00000505583 SLC27A6Q9Y2P4 619 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 PCDHA5Q9Y5H7 936 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 BAHCC1Q9P281 2608 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 CACNA1GO43497 2377 aa6.14□□□□□ -1.43
GYPB-205ENST00000505583 NYNRINQ9P2P1 1898 aaKnown RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 A0A1B0GTW7 788 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 METTL12A8MUP2 240 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 MEI4A8MW99 385 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 H0Y626 953 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 KCNK3O14649 394 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ZBTB24O43167 697 aaPredicted RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 TRIM16O95361 564 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 IGLV3-19P01714 112 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ATXN1LP0C7T5 689 aaKnown RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 CD46P15529 392 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 NR2F2P24468 414 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 HOXD9P28356 352 aaPredicted RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 HLA-FP30511 346 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ACSL1P33121 698 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ABL2P42684 1182 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 SGSHP51688 502 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 GOLGA8FQ08AF8 430 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 GOLGA8DPQ0D2H9 430 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 SLC14A1Q13336 389 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ZNF423Q2M1K9 1284 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 HLA-BQ31612 363 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ZCWPW2Q504Y3 356 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 RAB41Q5JT25 222 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 KCNT1Q5JUK3 1230 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 WDR45BQ5MNZ6 344 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 SYCP2LQ5T4T6 812 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 LAYNQ6UX15 382 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 CCNI2Q6ZMN8 369 aaPredicted RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 RABEPKQ7Z6M1 372 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 FAM217AQ8IXS0 508 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 CEP57L1Q8IYX8 460 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 BAHD1Q8TBE0 780 aaPredicted RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 MDM1Q8TC05 714 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 WFDC5Q8TCV5 224 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 CYB5D2Q8WUJ1 264 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 SIPA1Q96FS4 1042 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 HEXIM2Q96MH2 286 aaKnown RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 MTG2Q9H4K7 406 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 FAM124BQ9H5Z6 455 aaPredicted RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 C6orf106Q9H6K1 298 aaPredicted RBP6.13□□□□□ -1.43
GYPB-205ENST00000505583 GAREM1Q9H706 876 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 CYP3A43Q9HB55 503 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 GDPD2Q9HCC8 539 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ELOVL2Q9NXB9 296 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 MARCH2Q9P0N8 246 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 PCOLCE2Q9UKZ9 415 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 HPSEQ9Y251 543 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 BTBD3Q9Y2F9 522 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 FRMD4BQ9Y2L6 1034 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 ZDHHC9Q9Y397 364 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 GPSM3Q9Y4H4 160 aa6.13□□□□□ -1.43
GYPB-205ENST00000505583 FREM2Q5SZK8 3169 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 CELSR3Q9NYQ7 3312 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 A0A1B0GVT2 93 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 SLC12A8A0AV02 714 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 YJEFN3A6XGL0 299 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 E7ENQ6 273 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 LAMA5O15230 3695 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 MAPK13O15264 365 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 BCAT2O15382 392 aaPredicted RBP6.12□□□□□ -1.43
GYPB-205ENST00000505583 MSI1O43347 362 aaKnown RBP6.12□□□□□ -1.43
GYPB-205ENST00000505583 CALUO43852 315 aaPredicted RBP6.12□□□□□ -1.43
GYPB-205ENST00000505583 TSPAN3O60637 253 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 DKK1O94907 266 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 RHOBTB3O94955 611 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 EPHX1P07099 455 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 RALAP11233 206 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 GNSP15586 552 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 CMA1P23946 247 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 CHKAP35790 457 aa6.12□□□□□ -1.43
GYPB-205ENST00000505583 CSNK1EP49674 416 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms