RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 NLRP7Q8WX94 980 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 C12orf43Q96C57 262 aaKnown RBP13.68□□□□□ -0.22
LETM1-203ENST00000505551 MAN1C1Q9NR34 630 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 ZNF536O15090 1300 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 CCDC195A0A1B0GUA6 201 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 XPO1O14980 1071 aaKnown RBP13.68□□□□□ -0.22
LETM1-203ENST00000505551 NPM3O75607 178 aaKnown RBP13.68□□□□□ -0.22
LETM1-203ENST00000505551 FAM13AO94988 1023 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 CD58P19256 250 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 CTAG1AP78358 180 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 CTBSQ01459 385 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 SEPT6Q14141 434 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 RINT1Q6NUQ1 792 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 LILRA2Q8N149 483 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 EFHD2Q96C19 240 aaPredicted RBP13.68□□□□□ -0.22
LETM1-203ENST00000505551 NSMCE3Q96MG7 304 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 GCOM2Q9BZD3 368 aaPredicted RBP13.68□□□□□ -0.22
LETM1-203ENST00000505551 HIPK3Q9H422 1215 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 NCKIPSDQ9NZQ3 722 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 CNOT11Q9UKZ1 510 aaKnown RBP13.68□□□□□ -0.22
LETM1-203ENST00000505551 TMX2Q9Y320 296 aa13.68□□□□□ -0.22
LETM1-203ENST00000505551 DDX39AO00148 427 aaKnown RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 PSMD12O00232 456 aaPredicted RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 MSH4O15457 936 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 AQP9O43315 295 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 SGTAO43765 313 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 SIN3BO75182 1162 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 PTPN2P17706 415 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 CD300CQ08708 224 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 IL23RQ5VWK5 629 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 ANKRD22Q5VYY1 191 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 PCGF5Q86SE9 256 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 RHPN2Q8IUC4 686 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 MCOLN2Q8IZK6 566 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 MYCT1Q8N699 235 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 TRIM56Q9BRZ2 755 aaKnown RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 MAFFQ9ULX9 164 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 NOX1Q9Y5S8 564 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 KDM1AO60341 852 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 ESRRBO95718 433 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 CAP2P40123 477 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 MRPS5P82675 430 aaKnown RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 NFX1Q12986 1120 aaKnown RBP13.67□□□□□ -0.22
LETM1-203ENST00000505551 ATP1A4Q13733 1029 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 C1orf220Q5T0J3 134 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 LRRC49Q8IUZ0 686 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 NUDCD3Q8IVD9 361 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 PALM2Q8IXS6 379 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 PPIL6Q8IXY8 311 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 RNF169Q8NCN4 708 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 LENG9Q96B70 501 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 CMTM5Q96DZ9 223 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 STK39Q9UEW8 545 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 RABGAP1Q9Y3P9 1069 aa13.67□□□□□ -0.22
LETM1-203ENST00000505551 FAM47E-STBD1D6RA91 191 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 EIF2S1P05198 315 aaKnown RBP13.66□□□□□ -0.22
LETM1-203ENST00000505551 YWHAGP61981 247 aaKnown RBP eCLIP13.66□□□□□ -0.22
LETM1-203ENST00000505551 ALCAMQ13740 583 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 PRKG1Q13976 671 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 ZNF720Q7Z2F6 126 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 CARM1Q86X55 608 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 CLVS1Q8IUQ0 354 aaPredicted RBP13.66□□□□□ -0.22
LETM1-203ENST00000505551 NAT8LQ8N9F0 302 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 PCYOX1LQ8NBM8 494 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 HM13Q8TCT9 377 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 KBTBD7Q8WVZ9 684 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 NKD2Q969F2 451 aaPredicted RBP13.66□□□□□ -0.22
LETM1-203ENST00000505551 ANKRD36BP1Q96IX9 119 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 SENP7Q9BQF6 1050 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 DCUN1D5Q9BTE7 237 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 ATAD3AQ9NVI7 634 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 MYRFQ9Y2G1 1151 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 PRSS51A0A1B0GVH4 220 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 H0YJX3 145 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A9O60656 530 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 DGKIO75912 1065 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 ITGAVP06756 1048 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 INHBAP08476 426 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A6P19224 532 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A1P22309 533 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A4P22310 534 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A3P35503 534 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A5P35504 534 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 GCLMP48507 274 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 ZBED5Q49AG3 693 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 MOXD1Q6UVY6 613 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 FRMD7Q6ZUT3 714 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 TPH2Q8IWU9 490 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 GALNT4Q8N4A0 578 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 RDH13Q8NBN7 331 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 GSDMBQ8TAX9 411 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 GRIN3AQ8TCU5 1115 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 CPT1BQ92523 772 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 CCDC127Q96BQ5 260 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 ZNF778Q96MU6 729 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 COPS7BQ9H9Q2 264 aaPredicted RBP13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A7Q9HAW7 530 aa13.66□□□□□ -0.22
LETM1-203ENST00000505551 UGT1A10Q9HAW8 530 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms