RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 SORCS3Q9UPU3 1222 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 NR2E1Q9Y466 385 aa9.72□□□□□ -0.85
TPM3-218ENST00000505010 FAM92AA1XBS5 289 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 FSCN2O14926 492 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 GLUD1P00367 558 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 LRG1P02750 347 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 CD48P09326 243 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 CSH1P0DML2 217 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 CSH2P0DML3 217 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 RARGP13631 454 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 KRT10P13645 584 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 SP100P23497 879 aaPredicted RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 GBP1P32455 592 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 PSEN1P49768 467 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 CLCN5P51795 746 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 EPHB3P54753 998 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 CDH6P55285 790 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 COPS2P61201 443 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 ITIH3Q06033 890 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 PPP2R5EQ16537 467 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 BOLA3Q53S33 107 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 ZC3H12AQ5D1E8 599 aaKnown RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 KAZNQ674X7 775 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 BEND5Q7L4P6 421 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 RFX6Q8HWS3 928 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 KLHL7Q8IXQ5 586 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 MRPL43Q8N983 215 aaKnown RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 PDZD8Q8NEN9 1154 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 TEKT4Q8WW24 435 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 UBXN4Q92575 508 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 RMDN1Q96DB5 314 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 ZNF512Q96ME7 567 aaPredicted RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 TTLL2Q9BWV7 592 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 HEMGNQ9BXL5 484 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 CALN1Q9BXU9 219 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 S1PR5Q9H228 398 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 DHX35Q9H5Z1 703 aaKnown RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 PIGVQ9NUD9 493 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 OSER1Q9NX31 292 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.71□□□□□ -0.863e-11■□□□□ 9
TPM3-218ENST00000505010 FBXW11Q9UKB1 542 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 NUDT5Q9UKK9 219 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 AP4E1Q9UPM8 1137 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 IRAK3Q9Y616 596 aa9.71□□□□□ -0.86
TPM3-218ENST00000505010 HELZP42694 1942 aaKnown RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 EP300Q09472 2414 aaPredicted RBP9.71□□□□□ -0.86
TPM3-218ENST00000505010 ZFHX4Q86UP3 3567 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 hCG_1818297A0A087WSY0 165 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 TCRBV7S2A1N4TA0A589 114 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CCDC188H7C350 402 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 MDM4O15151 490 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 IRAK2O43187 625 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 MSI1O43347 362 aaKnown RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 PHF2O75151 1096 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ENDOD1O94919 500 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 F9P00740 461 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 C8AP07357 584 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 KDELR1P24390 212 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 PTPN7P35236 360 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CDKN2BP42772 138 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 DYNLT1P63172 113 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 EFEMP1Q12805 493 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 DPYSL3Q14195 570 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 PDK2Q15119 407 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ELF2Q15723 593 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CA9Q16790 459 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 DUSP6Q16828 381 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ERCC6LQ2NKX8 1250 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ARL13BQ3SXY8 428 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 TFDP3Q5H9I0 405 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 PPP6R3Q5H9R7 873 aaPredicted RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 EFHC2Q5JST6 749 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 C10orf120Q5SQS8 335 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ERMARDQ5T6L9 678 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CCDC70Q6NSX1 233 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 C8orf74Q6P047 294 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 MSANTD2Q6P1R3 559 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 TMEM184AQ6ZMB5 413 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CCDC149Q6ZUS6 474 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 BNIPLQ7Z465 357 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ANKS1BQ7Z6G8 1248 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 ITIH5Q86UX2 942 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 MAP7D3Q8IWC1 876 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CMASQ8NFW8 434 aaPredicted RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 VN1R2Q8NFZ6 395 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 MAIP1Q8WWC4 291 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 CASP10Q92851 521 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 RNF34Q969K3 372 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 PGAP3Q96FM1 320 aaPredicted RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 SERPINB11Q96P15 392 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 KRT12Q99456 494 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 HERPUD2Q9BSE4 406 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 NACA2Q9H009 215 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 DDX47Q9H0S4 455 aaKnown RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 PCDH18Q9HCL0 1135 aa9.7□□□□□ -0.86
TPM3-218ENST00000505010 OLA1Q9NTK5 396 aaKnown RBP9.7□□□□□ -0.86
TPM3-218ENST00000505010 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.7□□□□□ -0.86
TPM3-218ENST00000505010 CLIC5Q9NZA1 410 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms