RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 BBS12Q6ZW61 710 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 ACAD11Q709F0 780 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 ARID3BQ8IVW6 561 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-207ENST00000504761 UNC45BQ8IWX7 931 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 ERP27Q96DN0 273 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 KCNK16Q96T55 309 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 SF3B1O75533 1304 aaKnown RBP eCLIP14.5□□□□□ -0.096e-6■■■■■ 114.9
TCOF1-207ENST00000504761 FAM107AO95990 144 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 ERCC2P18074 760 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 AKT1P31749 480 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 PBX3P40426 434 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 DUPD1Q68J44 220 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 STRA8Q7Z7C7 330 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 DDIASQ8IXT1 998 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 RIBC1Q8N443 379 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-207ENST00000504761 TOP6BLQ8N6T0 577 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 RRN3Q9NYV6 651 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 GRID1Q9ULK0 1009 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 CACNA1SQ13698 1873 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 SPECC1L-ADORA2AF8WAN1 911 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 TRDMT1O14717 391 aaKnown RBP14.5□□□□□ -0.09
TCOF1-207ENST00000504761 MAP2K7O14733 419 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 CHRM3P20309 590 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 OR1D2P34982 312 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 HSP90AA5PQ58FG0 334 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 TAPT1Q6NXT6 567 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 C16orf59Q7L2K0 433 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 RASAL3Q86YV0 1011 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 FIZ1Q96SL8 496 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 ARHGAP39Q9C0H5 1083 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 ABCC13Q9NSE7 274 aa14.5□□□□□ -0.09
TCOF1-207ENST00000504761 MSI1O43347 362 aaKnown RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 HCRTO43612 131 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 SPATA31D3P0C874 917 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 ASPAP45381 313 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 DUSP4Q13115 394 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 RAP1GAP2Q684P5 730 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 SPATA31D4Q6ZUB0 917 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 SLC26A11Q86WA9 606 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 MYCBPAPQ8TBZ2 947 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 CCDC124Q96CT7 223 aaKnown RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 ECT2Q9H8V3 914 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 BCAP29Q9UHQ4 241 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 MEFVO15553 781 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 ACLYP53396 1101 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 PKN2Q16513 984 aaKnown RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 SH3PXD2AQ5TCZ1 1133 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 GDF6Q6KF10 455 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 LMNTD2Q8IXW0 634 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 SCLYQ96I15 445 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 MANSC1Q9H8J5 431 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 DYRK4Q9NR20 520 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 STXBP5LQ9Y2K9 1186 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 PIGRP01833 764 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 PSMB4P28070 264 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 CCND3P30281 292 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 KRT33BQ14525 404 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 TARBP2Q15633 366 aaKnown RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 PTAR1Q7Z6K3 402 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 E2F7Q96AV8 911 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 FTHL17Q9BXU8 183 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 MORF4L1Q9UBU8 362 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 DERAQ9Y315 318 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 XPO1O14980 1071 aaKnown RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 CYP1A1P04798 512 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 UNGP13051 313 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 TUFMP49411 452 aaKnown RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 TMTC4Q5T4D3 741 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 TIGD7Q6NT04 549 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 CRELD2Q6UXH1 353 aaPredicted RBP14.49□□□□□ -0.09
TCOF1-207ENST00000504761 CIPCQ9C0C6 399 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 PPCSQ9HAB8 311 aa14.49□□□□□ -0.09
TCOF1-207ENST00000504761 MDM4O15151 490 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 NCAM2O15394 837 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 AVILO75366 819 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ZNF189O75820 626 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-207ENST00000504761 NR2C2P49116 596 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 CLNS1AP54105 237 aaKnown RBP14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ATXN1P54253 815 aaKnown RBP14.48□□□□□ -0.09
TCOF1-207ENST00000504761 FOXD4Q12950 439 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-207ENST00000504761 CLEC4CQ8WTT0 213 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 GRAMD1AQ96CP6 724 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ATP13A1Q9HD20 1204 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ASMTLO95671 621 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 AMHP03971 560 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 SLC45A4Q5BKX6 768 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 FAM228AQ86W67 206 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 PPP2R3CQ969Q6 453 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 LRGUKQ96M69 825 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 C16orf70Q9BSU1 422 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 VCX3BQ9H321 246 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 PCDH18Q9HCL0 1135 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 MPP6Q9NZW5 540 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 SMIM24O75264 130 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ENO1P06733 434 aaKnown RBP14.48□□□□□ -0.09
TCOF1-207ENST00000504761 GBE1Q04446 702 aa14.48□□□□□ -0.09
TCOF1-207ENST00000504761 POLD3Q15054 466 aaPredicted RBP14.48□□□□□ -0.09
TCOF1-207ENST00000504761 ANKRD20A2Q5SQ80 823 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms