RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 PITX1P78337 314 aaPredicted RBP14.83□□□□□ -0.04
HOXC9-202ENST00000504557 ARID5AQ03989 594 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 MPPE1Q53F39 396 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 USP39Q53GS9 565 aaKnown RBP14.83□□□□□ -0.04
HOXC9-202ENST00000504557 DCAF6Q58WW2 860 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 ADGRF1Q5T601 910 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 NUGGCQ68CJ6 796 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 DPY19L2P1Q6NXN4 242 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 FAM183BPQ6ZVS7 135 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 TMEM110Q86TL2 294 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 UNC45BQ8IWX7 931 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 FAM71AQ8IYT1 594 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 CPXM2Q8N436 756 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 FRMD1Q8N878 549 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 ANKRD20A12PQ8NF67 263 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 IPO4Q8TEX9 1081 aaKnown RBP14.83□□□□□ -0.04
HOXC9-202ENST00000504557 STK32AQ8WU08 396 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 SORCS1Q8WY21 1168 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 TMA16Q96EY4 203 aaKnown RBP14.83□□□□□ -0.04
HOXC9-202ENST00000504557 SERPINB11Q96P15 392 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 ARRDC1-AS1Q9H2J1 176 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 SMOC1Q9H4F8 434 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 FAM204AQ9H8W3 233 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 POPDC2Q9HBU9 364 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 EBF1Q9UH73 591 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 PCDHGC3Q9UN70 934 aa14.83□□□□□ -0.04
HOXC9-202ENST00000504557 ZNF292O60281 2723 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 CCDC163A0A0D9SF12 145 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 MAP3K13O43283 966 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 ACSL4O60488 711 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 GFPT2O94808 682 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 RETP07949 1114 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 BCKDHBP21953 392 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 HOXD9P28356 352 aaPredicted RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 RPL34P49207 117 aaKnown RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 RNASE9P60153 205 aaKnown RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 YWHAZP63104 245 aaKnown RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 ELF2Q15723 593 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 HSF5Q4G112 596 aaPredicted RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 KIAA1211LQ6NV74 962 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 ANKS1BQ7Z6G8 1248 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 DEFB106AQ8N104 65 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 RNF34Q969K3 372 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 FCRL2Q96LA5 508 aaPredicted RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 SLC6A17Q9H1V8 727 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 XPO7Q9UIA9 1087 aaKnown RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.82□□□□□ -0.04
HOXC9-202ENST00000504557 PLXND1Q9Y4D7 1925 aa14.82□□□□□ -0.04
HOXC9-202ENST00000504557 F8VZ95 297 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 EPHB6O15197 1021 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 ZBTB24O43167 697 aaPredicted RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 TRUB2O95900 331 aaKnown RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 IGLV3-27P01718 113 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 APOEP02649 317 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 CYP11B1P15538 503 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 ID4P47928 161 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 NUMBP49757 651 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 BPIFB4P59827 614 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 CREB5Q02930 508 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 MEA1Q16626 185 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 PLK5Q496M5 336 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 PTPN20Q4JDL3 420 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 C2CD6Q53TS8 623 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 ZC3H12AQ5D1E8 599 aaKnown RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 NADSYN1Q6IA69 706 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 ARMCX6Q7L4S7 300 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 NOP9Q86U38 636 aaKnown RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 RASSF3Q86WH2 238 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 CACUL1Q86Y37 369 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 FAM217AQ8IXS0 508 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 CFAP52Q8N1V2 620 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 DEFB119Q8N690 84 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 UCMAQ8WVF2 138 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 TRIM62Q9BVG3 475 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 NAA15Q9BXJ9 866 aaKnown RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 STK33Q9BYT3 514 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 NUCKS1Q9H1E3 243 aaKnown RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 DUSP15Q9H1R2 295 aaPredicted RBP14.81□□□□□ -0.04
HOXC9-202ENST00000504557 GANQ9H2C0 597 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 LHX5Q9H2C1 402 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 SEMA4GQ9NTN9 838 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 ABCB8Q9NUT2 735 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 FBXO10Q9UK96 956 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 TLR6Q9Y2C9 796 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 STON1Q9Y6Q2 735 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 CKAP5Q14008 2032 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 PI4KAP42356 2102 aa14.81□□□□□ -0.04
HOXC9-202ENST00000504557 ADAMTS9Q9P2N4 1935 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 RHOBTB1O94844 696 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 MMEP08473 750 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 GABRG2P18507 467 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 DHPSP49366 369 aaPredicted RBP14.8□□□□□ -0.04
HOXC9-202ENST00000504557 RPS24P62847 133 aaKnown RBP14.8□□□□□ -0.04
HOXC9-202ENST00000504557 CDK17Q00537 523 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 UBXN1Q04323 297 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 NME3Q13232 169 aa14.8□□□□□ -0.04
HOXC9-202ENST00000504557 SF3A2Q15428 464 aaKnown RBP14.8□□□□□ -0.04
HOXC9-202ENST00000504557 SYCP1Q15431 976 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms