RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SHHQ15465 462 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ZC3H12AQ5D1E8 599 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 C10orf120Q5SQS8 335 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 HECTD3Q5T447 861 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 PLPP4Q5VZY2 271 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TMCO3Q6UWJ1 677 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 C4orf22Q6V702 233 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 RFX8Q6ZV50 586 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 GSTA5Q7RTV2 222 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 DNAJB7Q7Z6W7 309 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 LZTR1Q8N653 840 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 PLD5Q8N7P1 536 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 LEMD2Q8NC56 503 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 KREMEN2Q8NCW0 462 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC35B2Q8TB61 432 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ADAM32Q8TC27 787 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ACTL9Q8TC94 416 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 C1orf54Q8WWF1 131 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 AUTS2Q8WXX7 1259 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 SEC14L1Q92503 715 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 CASP10Q92851 521 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ACSF2Q96CM8 615 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 BTN2A3PQ96KV6 586 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 CCDC114Q96M63 670 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 GCNAQ96QF7 691 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 KCTD15Q96SI1 283 aaPredicted RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ERP44Q9BS26 406 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ADAM33Q9BZ11 813 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 NACA2Q9H009 215 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 BRD8Q9H0E9 1235 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 TSPYL1Q9H0U9 437 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 CATSPERBQ9H7T0 1116 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 NMUR1Q9HB89 426 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 EPB41L5Q9HCM4 733 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ARFGAP3Q9NP61 516 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 GDF3Q9NR23 364 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 MTMR10Q9NXD2 777 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 CWC15Q9P013 229 aaKnown RBP8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 MARCH2Q9P0N8 246 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 COX16Q9P0S2 106 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 CALCOCO1Q9P1Z2 691 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ZMYM5Q9UJ78 669 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 ZNF148Q9UQR1 794 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 NR2E1Q9Y466 385 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 PLXNA3P51805 1871 aa8.42□□□□□ -1.06
TOPBP1-202ENST00000503338 KCNU1A8MYU2 1149 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 SMAPO00193 183 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 TTI1O43156 1089 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 ATP8B1O43520 1251 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CREB3O43889 395 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 XYLBO75191 536 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 C8AP07357 584 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CA3P07451 260 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CD48P09326 243 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 HNRNPA1P09651 372 aaKnown RBP eCLIP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 MX2P20592 715 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 DDX6P26196 483 aaKnown RBP eCLIP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 HOXC13P31276 330 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 BMP8BP34820 402 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CLCN4P51793 760 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 EIF3EP60228 445 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 ERVFC1P60507 584 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 VSNL1P62760 191 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 DYNLT1P63172 113 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 OTUD4Q01804 1114 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CAV1Q03135 178 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 EFEMP1Q12805 493 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CALCOCO2Q13137 446 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 MMRN1Q13201 1228 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 SEMA3BQ13214 749 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 GPM6BQ13491 265 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 MTMR3Q13615 1198 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 PTK6Q13882 451 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 OASLQ15646 514 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CA9Q16790 459 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 RAB6CQ53S08 254 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 PPM1LQ5SGD2 360 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 C9orf50Q5SZB4 431 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 EMBQ6PCB8 327 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 LRRC31Q6UY01 552 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CCNI2Q6ZMN8 369 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CEP128Q6ZU80 1094 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 ANKS1BQ7Z6G8 1248 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 MTERF4Q7Z6M4 381 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 LRRC49Q8IUZ0 686 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CDKL3Q8IVW4 592 aaPredicted RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 ZDHHC14Q8IZN3 488 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 PCDH19Q8TAB3 1148 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 GPR152Q8TDT2 470 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 RSAD2Q8WXG1 361 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 MRPS31Q92665 395 aaKnown RBP8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 PPP2R3CQ969Q6 453 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 AZIN2Q96A70 460 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 PLD4Q96BZ4 506 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 LRRC45Q96CN5 670 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 TBC1D31Q96DN5 1066 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 SLC39A13Q96H72 371 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 PNKPQ96T60 521 aa8.41□□□□□ -1.06
TOPBP1-202ENST00000503338 CDCA3Q99618 268 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms