RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 USP13Q92995 863 aaPredicted RBP21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 NTAN1Q96AB6 310 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 PLD4Q96BZ4 506 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 ACSF2Q96CM8 615 aaPredicted RBP21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 GDE1Q9NZC3 331 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 FZD10Q9ULW2 581 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 CCL26Q9Y258 94 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 SPTBN5Q9NRC6 3674 aaKnown RBP21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 FANCGO15287 622 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 APOEP02649 317 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 IRF1P10914 325 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 CTNNA2P26232 953 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 HARS2P49590 506 aaKnown RBP21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 PEX5P50542 639 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 NUGGCQ68CJ6 796 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 TTC16Q8NEE8 873 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 WBP2Q969T9 261 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 SNRNP25Q9BV90 132 aaKnown RBP21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 MAGEB5Q9BZ81 275 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 CDH7Q9ULB5 785 aa21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDC42SE2-206ENST00000503291 DDX3YO15523 660 aaKnown RBP21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 PRAMEF12O95522 483 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 MOCS2O96007 188 aaPredicted RBP21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 KLKB1P03952 638 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 ATP1A1P05023 1023 aaKnown RBP21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 AIF1P55008 147 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 HSPH1Q92598 858 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 GPATCH2LQ9NWQ4 482 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 SLC12A6Q9UHW9 1150 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 XPO7Q9UIA9 1087 aaKnown RBP21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 GRXCR2A6NFK2 248 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 ZFYVE27Q5T4F4 411 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 UBL4BQ8N7F7 174 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 SH3RF2Q8TEC5 729 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 TEKT4Q8WW24 435 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 ALG3Q92685 438 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 MYADMQ96S97 322 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 AP4E1Q9UPM8 1137 aa21.16■□□□□ 0.98
CDC42SE2-206ENST00000503291 LEFTY2O00292 366 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 PAGE1O75459 146 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 TUBB4AP04350 444 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 WEE1P30291 646 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 CORO1AP31146 461 aaKnown RBP21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 SCAPQ12770 1279 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 CA9Q16790 459 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 EFHC2Q5JST6 749 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 FAM78AQ5JUQ0 283 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 ATP6V0D2Q8N8Y2 350 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 BTN2A3PQ96KV6 586 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 ASB16Q96NS5 453 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 HAPLN3Q96S86 360 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 NAPGQ99747 312 aaPredicted RBP21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 KLHL11Q9NVR0 708 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 CFAP97Q9P2B7 532 aa21.15■□□□□ 0.98
CDC42SE2-206ENST00000503291 CTAGE9A4FU28 777 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 KIF2AO00139 706 aaPredicted RBP21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 MBTPS2O43462 519 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 CASQ1P31415 396 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 GBP2P32456 591 aaPredicted RBP21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 SMAD4Q13485 552 aaKnown RBP21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 PSTKQ8IV42 348 aaKnown RBP21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 DENND1CQ8IV53 801 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 PYROXD2Q8N2H3 581 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 SMARCD2Q92925 531 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 PSMB7Q99436 277 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 SIK2Q9H0K1 926 aa21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 DHX35Q9H5Z1 703 aaKnown RBP21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 DDX56Q9NY93 547 aaKnown RBP21.14■□□□□ 0.98
CDC42SE2-206ENST00000503291 GREM1O60565 184 aa21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 RWDD2BP57060 319 aa21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 DDX42Q86XP3 938 aaKnown RBP eCLIP21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 KATNAL2Q8IYT4 538 aa21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 KCTD6Q8NC69 237 aa21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 RAPGEF5Q92565 580 aa21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 SH3BP1Q9Y3L3 701 aa21.14■□□□□ 0.97
CDC42SE2-206ENST00000503291 SCAMP3O14828 347 aaKnown RBP21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 LAMP2P13473 410 aa21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 HTR3DQ70Z44 454 aa21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 RIN3Q8TB24 985 aa21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 AZIN2Q96A70 460 aa21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 DCLK3Q9C098 648 aa21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 AGO1Q9UL18 857 aaKnown RBP21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 SNX10Q9Y5X0 201 aa21.13■□□□□ 0.97
CDC42SE2-206ENST00000503291 ZRANB2O95218 330 aaKnown RBP eCLIP21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 L1CAMP32004 1257 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 VIPR2P41587 438 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 SLC11A2P49281 568 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 MLLT6P55198 1093 aaPredicted RBP21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 MTA1Q13330 715 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 DPYSL2Q16555 572 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 ODF2Q5BJF6 829 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 CELF5Q8N6W0 485 aaKnown RBP21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 ZNF592Q92610 1267 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 OSBPL2Q9H1P3 480 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 OR12D3Q9UGF7 316 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 LSM7Q9UK45 103 aaKnown RBP21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 HS3ST4Q9Y661 456 aa21.12■□□□□ 0.97
CDC42SE2-206ENST00000503291 DOCK8Q8NF50 2099 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms