RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RAB27AP51159 221 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 CNPY1Q3B7I2 92 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 LPCAT4Q643R3 524 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 HORMAD1Q86X24 394 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 DHRSXQ8N5I4 330 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 HPDLQ96IR7 371 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 BTBD9Q96Q07 612 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 TRIM62Q9BVG3 475 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 PEAK1Q9H792 1746 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 SUPT7LO94864 414 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 HMGCS2P54868 508 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 MYL6P60660 151 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 C16orf46Q6P387 395 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 C7orf26Q96N11 449 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 TAAR1Q96RJ0 339 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 SPATA16Q9BXB7 569 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 PNPLA3Q9NST1 481 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 RGSL1A5PLK6 1076 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 BANF1O75531 89 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 SHMT1P34896 483 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 TWF2Q6IBS0 349 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 ADCY4Q8NFM4 1077 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 FAM162AQ96A26 154 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 OSBPL11Q9BXB4 747 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 TEX13BQ9BXU2 312 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 UBE2OQ9C0C9 1292 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 KCNQ5Q9NR82 932 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 IARS2Q9NSE4 1012 aaKnown RBP17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 ITGA11Q9UKX5 1188 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 NRXN3Q9Y4C0 1643 aa17.66■□□□□ 0.42
HMGXB3-201ENST00000502717 hCG_1818297A0A087WSY0 165 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 A0A096LPK6 155 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 E5RI56 91 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 TRAF2Q12933 501 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 NEDD8Q15843 81 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 ATP13A4Q4VNC1 1196 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 ACSBG2Q5FVE4 666 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 PHF13Q86YI8 300 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 COLGALT1Q8NBJ5 622 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 ZSCAN18Q8TBC5 510 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 RBBP8Q99708 897 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 HMG20AQ9NP66 347 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 TISP43B9A030 160 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 MTA2O94776 668 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 ALDH1A1P00352 501 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 RTP1P59025 263 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 BBS12Q6ZW61 710 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 SEMA6AQ9H2E6 1030 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 NKX1-2Q9UD57 310 aaPredicted RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 R3HDM2Q9Y2K5 976 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 MAGEB16A2A368 324 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 WDR27A2RRH5 827 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 NFIBO00712 420 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 GRIK3Q13003 919 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 SEZ6Q53EL9 994 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 CCDC81Q6ZN84 652 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 GIPC3Q8TF64 312 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 OSCP1Q8WVF1 389 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 C10orf82Q8WW14 230 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 TUBGCP3Q96CW5 907 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 AGO4Q9HCK5 861 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 DNAJB4Q9UDY4 337 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 TCRBV9S1A1TA0A576 114 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 MAP3K13O43283 966 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 WDR47O94967 919 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 MRC1P22897 1456 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 RPL14P50914 215 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 TRIM60Q495X7 471 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 TTC7BQ86TV6 843 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 P3H2Q8IVL5 708 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 ATPAF2Q8N5M1 289 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 ZSWIM2Q8NEG5 633 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 RP9Q8TA86 221 aaKnown RBP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 USP33Q8TEY7 942 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 SEPT1Q8WYJ6 367 aa17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.65■□□□□ 0.42
HMGXB3-201ENST00000502717 CHD2O14647 1828 aaKnown RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 MRASO14807 208 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 CCDC166P0CW27 439 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 HOXA10P31260 410 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 AVPR1AP37288 418 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 FCGRTP55899 365 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 TAS2R40P59535 323 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 GTF2BQ00403 316 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 INAQ16352 499 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 RFWD3Q6PCD5 774 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 ADGRD1Q6QNK2 874 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC30A10Q6XR72 485 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 UTP6Q9NYH9 597 aaKnown RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 TAS2R1Q9NYW7 299 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SAE1Q9UBE0 346 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 TRMUO75648 421 aaKnown RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 VIL1P09327 827 aaKnown RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SPANXN3Q5MJ09 141 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 ANGPTL8Q6UXH0 198 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SAMD3Q8N6K7 520 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 SHCBP1Q8NEM2 672 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 ELMO3Q96BJ8 720 aa17.64■□□□□ 0.41
HMGXB3-201ENST00000502717 PPP1R14BQ96C90 147 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms