RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 TAC4Q86UU9 113 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 LONP2Q86WA8 852 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 TXNDC5Q8NBS9 432 aaKnown RBP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 ZNF397Q8NF99 534 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 RNF34Q969K3 372 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 SLC39A13Q96H72 371 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FCRL2Q96LA5 508 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 SLC2A13Q96QE2 648 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 SLC2A11Q9BYW1 496 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 FAM204AQ9H8W3 233 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 POLR3BQ9NW08 1133 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.28
HSPG2-213ENST00000498495 STARD13Q9Y3M8 1113 aa13.31□□□□□ -0.28
HSPG2-213ENST00000498495 ATG2BQ96BY7 2078 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 SYNJ2BP-COX16A0A087WUM0 186 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 IRAK2O43187 625 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 KLF8O95600 359 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 MOCS2O96007 188 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 LMNAP02545 664 aaKnown RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 CYP1A1P04798 512 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 SLC2A3P11169 496 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 KIR2DL1P43626 348 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 UBASH3AP57075 661 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 NOMO3P69849 1222 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 DMWDQ09019 674 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 C2CD6Q53TS8 623 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 ZC3H12AQ5D1E8 599 aaKnown RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 EOGTQ5NDL2 527 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 FAM102AQ5T9C2 384 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 SDE2Q6IQ49 451 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 ALLCQ8N6M5 410 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 ZNF513Q8N8E2 541 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 ATP6V0D2Q8N8Y2 350 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 IL17RCQ8NAC3 791 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 AGPAT1Q99943 283 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 IRX2Q9BZI1 471 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 SEPT11Q9NVA2 429 aaKnown RBP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 DDIT4Q9NX09 232 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 RRN3Q9NYV6 651 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.3□□□□□ -0.28
HSPG2-213ENST00000498495 COX16Q9P0S2 106 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 MMP17Q9ULZ9 603 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 MYO6Q9UM54 1294 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 SLC27A6Q9Y2P4 619 aa13.3□□□□□ -0.28
HSPG2-213ENST00000498495 TYW5A2RUC4 315 aaKnown RBP13.29□□□□□ -0.28
HSPG2-213ENST00000498495 PRRT4C9JH25 899 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 GOLGA8SH3BPF8 625 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 M0QYT0 321 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 GFRA3O60609 400 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 LILRB5O75023 590 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 DAB1O75553 588 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 IGLV3-25P01717 112 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 UNGP13051 313 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-213ENST00000498495 ABCB4P21439 1286 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 HOXC13P31276 330 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 SLC6A4P31645 630 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 CCR1P32246 355 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 CNR2P34972 360 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 SCNN1AP37088 669 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 MATKP42679 507 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 PXNP49023 591 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-213ENST00000498495 PITX1P78337 314 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-213ENST00000498495 NME3Q13232 169 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 CRY1Q16526 586 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 PIK3R6Q5UE93 754 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 RFWD3Q6PCD5 774 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 XYLT1Q86Y38 959 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 TSTD1Q8NFU3 115 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 SLC30A5Q8TAD4 765 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 P2RY11Q96G91 374 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 HHIPQ96QV1 700 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 PCDHB18PQ96TA0 734 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 NUP58Q9BVL2 599 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 POLMQ9NP87 494 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-213ENST00000498495 ZDHHC4Q9NPG8 344 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 CLEC4EQ9ULY5 219 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 MUC6Q6W4X9 2439 aa13.29□□□□□ -0.28
HSPG2-213ENST00000498495 WDFY4Q6ZS81 3184 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 CCDC163A0A0D9SF12 145 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 PRR23AA6NEV1 266 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 SGK1O00141 431 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 TBL1XO60907 577 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 ALDH1A2O94788 518 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 APBB3O95704 486 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 TNFAIP3P21580 790 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 MMP8P22894 467 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 HOXD9P28356 352 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-213ENST00000498495 NTSR1P30989 418 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-213ENST00000498495 NSFP46459 744 aaKnown RBP13.28□□□□□ -0.28
HSPG2-213ENST00000498495 SULT1E1P49888 294 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 DGKEP52429 567 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 EIF4EBP2Q13542 120 aaPredicted RBP13.28□□□□□ -0.28
HSPG2-213ENST00000498495 GEN1Q17RS7 908 aa13.28□□□□□ -0.28
HSPG2-213ENST00000498495 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
HSPG2-213ENST00000498495 MS4A13Q5J8X5 152 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms