RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 NUP62CLQ9H1M0 184 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 ST7Q9NRC1 585 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 RXFP3Q9NSD7 469 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 CACNA2D2Q9NY47 1150 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 CALCOCO1Q9P1Z2 691 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 APEX2Q9UBZ4 518 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 STOML2Q9UJZ1 356 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 RAD54BQ9Y620 910 aa8.84□□□□□ -0.99
HMGXB4-207ENST00000498212 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 WASH3PC4AMC7 463 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 SNPHO15079 494 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 NPC1O15118 1278 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 SART1O43290 800 aaKnown RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 AP5Z1O43299 807 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 TSPAN3O60637 253 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 IGLV3-27P01718 113 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 NDUFV2P19404 249 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 HOXD9P28356 352 aaPredicted RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 USP8P40818 1118 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 RPL34P49207 117 aaKnown RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 SLC11A2P49281 568 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 LIMK1P53667 647 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 RING1Q06587 406 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 EIF4HQ15056 248 aaKnown RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 E2F5Q15329 346 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 MAN2A1Q16706 1144 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 ARHGAP44Q17R89 818 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 MAP7D1Q3KQU3 841 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 DPCR1Q3MIW9 517 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 SPDYCQ5MJ68 293 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 NUGGCQ68CJ6 796 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 IL31Q6EBC2 164 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 TCEAL6Q6IPX3 200 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 DENND1BQ6P3S1 775 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 SLC36A4Q6YBV0 504 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 ANKS1BQ7Z6G8 1248 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 TMEFF1Q8IYR6 380 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 STK32AQ8WU08 396 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 TCEAL3Q969E4 200 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 TMA16Q96EY4 203 aaKnown RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 SERPINB11Q96P15 392 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 TRIM62Q9BVG3 475 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 THAP9Q9H5L6 903 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 CD248Q9HCU0 757 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 THAP10Q9P2Z0 257 aaPredicted RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 DACH1Q9UI36 760 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 MBD1Q9UIS9 605 aaPredicted RBP8.83□□□□□ -1
HMGXB4-207ENST00000498212 CLEC4EQ9ULY5 219 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 STON1Q9Y6Q2 735 aa8.83□□□□□ -1
HMGXB4-207ENST00000498212 TP53BP1Q12888 1972 aaPredicted RBP8.82□□□□□ -1
HMGXB4-207ENST00000498212 IGHV1OR15-9A0A0B4J2B8 117 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 BECN2A8MW95 431 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 E5RJQ4 531 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 CAPN9O14815 690 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 KHNYNO15037 678 aaKnown RBP8.82□□□□□ -1
HMGXB4-207ENST00000498212 IRAK2O43187 625 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ACSL4O60488 711 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ZNF217O75362 1048 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 FYNP06241 537 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 PON1P27169 355 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ERCC5P28715 1186 aaPredicted RBP8.82□□□□□ -1
HMGXB4-207ENST00000498212 IL12RB1P42701 662 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 TBX4P57082 545 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 APBA1Q02410 837 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 RPL6Q02878 288 aaKnown RBP8.82□□□□□ -1
HMGXB4-207ENST00000498212 ARID5AQ03989 594 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 NNTQ13423 1086 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ENPP2Q13822 863 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ZNF234Q14588 700 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 STARD3Q14849 445 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 STPG1Q5TH74 334 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 RNF43Q68DV7 783 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 CLEC17AQ6ZS10 378 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 BEND5Q7L4P6 421 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ARMCX6Q7L4S7 300 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 DQX1Q8TE96 717 aaKnown RBP8.82□□□□□ -1
HMGXB4-207ENST00000498212 SHC3Q92529 594 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 PIGKQ92643 395 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 MRGPRX1Q96LB2 322 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 TUBGCP2Q9BSJ2 902 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 EDEM2Q9BV94 578 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 SLC4A5Q9BY07 1137 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
HMGXB4-207ENST00000498212 CIPCQ9C0C6 399 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 NDST4Q9H3R1 872 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ACP6Q9NPH0 428 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 ELOVL2Q9NXB9 296 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 CYTH4Q9UIA0 394 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 NAALADL1Q9UQQ1 740 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 TLR6Q9Y2C9 796 aa8.82□□□□□ -1
HMGXB4-207ENST00000498212 PCDH15Q96QU1 1955 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 CEP250Q9BV73 2442 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 WDR87Q6ZQQ6 2873 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 DNAH14Q0VDD8 3507 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 GOLGA6L7A0A1B0GV03 622 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 LNP1A1A4G5 178 aa8.81□□□□□ -1
HMGXB4-207ENST00000498212 TYW5A2RUC4 315 aaKnown RBP8.81□□□□□ -1
HMGXB4-207ENST00000498212 PATE3B3GLJ2 98 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms