RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 CENPIQ92674 756 aaPredicted RBP12.36□□□□□ -0.43
CUX1-210ENST00000497815 NXPE3Q969Y0 559 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 PGAP3Q96FM1 320 aaPredicted RBP12.36□□□□□ -0.43
CUX1-210ENST00000497815 ASIC4Q96FT7 647 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 TKTL2Q9H0I9 626 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 EBF3Q9H4W6 596 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 WDCPQ9H6R7 721 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 TMPRSS4Q9NRS4 437 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 TRIM10Q9UDY6 481 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 PCSK1NQ9UHG2 260 aa12.36□□□□□ -0.43
CUX1-210ENST00000497815 XPO7Q9UIA9 1087 aaKnown RBP12.36□□□□□ -0.43
CUX1-210ENST00000497815 HELZP42694 1942 aaKnown RBP12.35□□□□□ -0.43
CUX1-210ENST00000497815 DOCK8Q8NF50 2099 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 MACROD2A1Z1Q3 448 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 TRDMT1O14717 391 aaKnown RBP12.35□□□□□ -0.43
CUX1-210ENST00000497815 SLC9A3R1O14745 358 aaPredicted RBP12.35□□□□□ -0.43
CUX1-210ENST00000497815 BUB1O43683 1085 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 TSPAN3O60637 253 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 RNF8O76064 485 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 ENDOD1O94919 500 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 SLC2A3P11169 496 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 GGCXP38435 758 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 SLC11A2P49281 568 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 KIF5AQ12840 1032 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 PIGHQ14442 188 aaPredicted RBP12.35□□□□□ -0.43
CUX1-210ENST00000497815 PPP2R5DQ14738 602 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 Q6ZNB5 142 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 BNIPLQ7Z465 357 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 CPNE8Q86YQ8 564 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 CCDC185Q8N715 623 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 ATP6V0D2Q8N8Y2 350 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 FNIP1Q8TF40 1166 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 UHRF1Q96T88 793 aaPredicted RBP12.35□□□□□ -0.43
CUX1-210ENST00000497815 SIK2Q9H0K1 926 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 ANLNQ9NQW6 1124 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 TBC1D14Q9P2M4 693 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 SLC12A6Q9UHW9 1150 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 SALL4Q9UJQ4 1053 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 PAXBP1Q9Y5B6 917 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 SNX10Q9Y5X0 201 aa12.35□□□□□ -0.43
CUX1-210ENST00000497815 TCF20Q9UGU0 1960 aaKnown RBP12.35□□□□□ -0.43
CUX1-210ENST00000497815 KCNU1A8MYU2 1149 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 I6L893 689 aaPredicted RBP12.34□□□□□ -0.43
CUX1-210ENST00000497815 CHADO15335 359 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 PJA2O43164 708 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 ACSL4O60488 711 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 LRCH4O75427 683 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 PAGE1O75459 146 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 MTA2O94776 668 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 PROSCO94903 275 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 TCF4P15884 667 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 MIPP30301 263 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 GJC1P36383 396 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 PDGFRLQ15198 375 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 EML3Q32P44 896 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 ARL13BQ3SXY8 428 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 BRMS1LQ5PSV4 323 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 NADSYN1Q6IA69 706 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 RFWD3Q6PCD5 774 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 TPGS1Q6ZTW0 290 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 ARFGAP1Q8N6T3 406 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 CSGALNACT1Q8TDX6 532 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 IRF7Q92985 503 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 BHMTQ93088 406 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 BTN2A3PQ96KV6 586 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 FAM83CQ9BQN1 747 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 ZWILCHQ9H900 591 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 LZTFL1Q9NQ48 299 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 HPS4Q9NQG7 708 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 GPATCH2LQ9NWQ4 482 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 ARHGEF38Q9NXL2 777 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 GTSE1Q9NYZ3 720 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 MUTYHQ9UIF7 546 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 SORCS3Q9UPU3 1222 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 ZNF510Q9Y2H8 683 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 PPP2R2CQ9Y2T4 447 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 HYOU1Q9Y4L1 999 aa12.34□□□□□ -0.43
CUX1-210ENST00000497815 A0A0A6YYK5 440 aaPredicted RBP12.33□□□□□ -0.44
CUX1-210ENST00000497815 PRPSAP2O60256 369 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 BUB1BO60566 1050 aaPredicted RBP12.33□□□□□ -0.44
CUX1-210ENST00000497815 MOCS3O95396 460 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 NFATC1O95644 943 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 SLC6A4P31645 630 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 ADRA1BP35368 520 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 RUNX3Q13761 415 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 ANO4Q32M45 955 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 FAM133BQ5BKY9 247 aaKnown RBP12.33□□□□□ -0.44
CUX1-210ENST00000497815 MS4A13Q5J8X5 152 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 ADGRF1Q5T601 910 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 SLFN11Q7Z7L1 901 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 CHSY1Q86X52 802 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 TMEM25Q86YD3 366 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 ADGRG2Q8IZP9 1017 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 LGI2Q8N0V4 545 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 CPA6Q8N4T0 437 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 NIPA2Q8N8Q9 360 aa12.33□□□□□ -0.44
CUX1-210ENST00000497815 ATP2A3Q93084 1043 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms