RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 SPAG5Q96R06 1193 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 XPO7Q9UIA9 1087 aaKnown RBP16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 MMP17Q9ULZ9 603 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 SLC27A6Q9Y2P4 619 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 STARD13Q9Y3M8 1113 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 EML5Q05BV3 1969 aa16.78■□□□□ 0.28
DNMT3A-215ENST00000496570 TBC1D3BA6NDS4 549 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 SGK1O00141 431 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 CAPN9O14815 690 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 HRO43593 1189 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 ACSL4O60488 711 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 TSPAN3O60637 253 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 HSF2BPO75031 334 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 DAB1O75553 588 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 TIE1P35590 1138 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 DGKGP49619 791 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 NRLP54845 237 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 NR1I3Q14994 352 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 DCAF6Q58WW2 860 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 C10orf76Q5T2E6 689 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 NAA35Q5VZE5 725 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 NUGGCQ68CJ6 796 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 HEATR6Q6AI08 1181 aaKnown RBP16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 TRNP1Q6NT89 227 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 RFWD3Q6PCD5 774 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 TMEM92Q6UXU6 159 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 UNC45BQ8IWX7 931 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 IPO4Q8TEX9 1081 aaKnown RBP16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 ACDQ96AP0 544 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 PRICKLE1Q96MT3 831 aaPredicted RBP16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 HHIPQ96QV1 700 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 SYT11Q9BT88 431 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 TRIM62Q9BVG3 475 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 TTYH3Q9C0H2 523 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 EPC1Q9H2F5 836 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 SEMA4AQ9H3S1 761 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 CEP83Q9Y592 693 aa16.77■□□□□ 0.28
DNMT3A-215ENST00000496570 GPR179Q6PRD1 2367 aa16.77■□□□□ 0.27
DNMT3A-215ENST00000496570 ZNF292O60281 2723 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 A0A1W2PQC6 194 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 GFRA3O60609 400 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 KLF8O95600 359 aaPredicted RBP16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 UNGP13051 313 aaPredicted RBP16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 TFE3P19532 575 aaPredicted RBP16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 SCNN1AP37088 669 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 PBX1P40424 430 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 PTP4A2Q12974 167 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 SRSF5Q13243 272 aaKnown RBP16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 GEN1Q17RS7 908 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 MPPE1Q53F39 396 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 ZC3H12AQ5D1E8 599 aaKnown RBP16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 PIK3R6Q5UE93 754 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 EGFLAMQ63HQ2 1017 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 ERICH1Q86X53 443 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 ZDHHC17Q8IUH5 632 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 CAMKK1Q8N5S9 505 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 TXNDC5Q8NBS9 432 aaKnown RBP16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 CCDC26Q8TAB7 109 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 WFDC5Q8TCV5 224 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 ATRIPQ8WXE1 791 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 NT5C3BQ969T7 300 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 C18orf8Q96DM3 657 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 ACOX2Q99424 681 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 PDCL3Q9H2J4 239 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 CD248Q9HCU0 757 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 SLC8A2Q9UPR5 921 aa16.76■□□□□ 0.27
DNMT3A-215ENST00000496570 KCNU1A8MYU2 1149 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 MMP8P22894 467 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 FANCCQ00597 558 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 CRY1Q16526 586 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 HSF5Q4G112 596 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 PREPLQ4J6C6 727 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 E4F1Q66K89 784 aaPredicted RBP16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 TMEM215Q68D42 235 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 IRF2BP2Q7Z5L9 587 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 KCNV2Q8TDN2 545 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 DDI1Q8WTU0 396 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 NPY6RQ99463 290 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 PRMT1Q99873 361 aaKnown RBP16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 NUCKS1Q9H1E3 243 aaKnown RBP16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 SYNCQ9H7C4 482 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 TMEM59LQ9UK28 342 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 OTOGLQ3ZCN5 2332 aa16.75■□□□□ 0.27
DNMT3A-215ENST00000496570 MYO18AQ92614 2054 aaKnown RBP16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 CCDC163A0A0D9SF12 145 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 I6L893 689 aaPredicted RBP16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 CAVIN2O95810 425 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 LMNAP02545 664 aaKnown RBP16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 CYBBP04839 570 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 NOS2P35228 1153 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 FLT3P36888 993 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 MATKP42679 507 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 SLC11A2P49281 568 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 SNX16P57768 344 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 ZNF445P59923 1031 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 CDK17Q00537 523 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 ARID5AQ03989 594 aa16.74■□□□□ 0.27
DNMT3A-215ENST00000496570 NFKBIBQ15653 356 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms