RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 AIF1P55008 147 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 HTR4Q13639 388 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 HADHQ16836 314 aaKnown RBP22.59■■□□□ 1.21
C9orf3-222ENST00000496567 RAB6CQ53S08 254 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 DENND1CQ8IV53 801 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 REXO1L1PQ8IX06 675 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 ARFGAP1Q8N6T3 406 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 DEPDC1BQ8WUY9 529 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 RSPRY1Q96DX4 576 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 TKTL2Q9H0I9 626 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 RAB6CQ9H0N0 254 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 TRMT1Q9NXH9 659 aaKnown RBP22.59■■□□□ 1.21
C9orf3-222ENST00000496567 TBC1D14Q9P2M4 693 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 USP18Q9UMW8 372 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 NUMBLQ9Y6R0 609 aa22.59■■□□□ 1.21
C9orf3-222ENST00000496567 COL6A3P12111 3177 aa22.58■■□□□ 1.21
C9orf3-222ENST00000496567 LOC730098B7Z3J9 87 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 SLC9A3R1O14745 358 aaPredicted RBP22.58■■□□□ 1.2
C9orf3-222ENST00000496567 GREM1O60565 184 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 MOCS3O95396 460 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 KLKB1P03952 638 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 SSR1P43307 286 aaKnown RBP22.58■■□□□ 1.2
C9orf3-222ENST00000496567 ACBD5Q5T8D3 534 aaPredicted RBP22.58■■□□□ 1.2
C9orf3-222ENST00000496567 VITQ6UXI7 678 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 Q6ZNB5 142 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 SYCE1Q8N0S2 351 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 CCAR2Q8N163 923 aaKnown RBP22.58■■□□□ 1.2
C9orf3-222ENST00000496567 KIAA1524Q8TCG1 905 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 WBP2Q969T9 261 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 NTAN1Q96AB6 310 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 ASB2Q96Q27 587 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 KXD1Q9BQD3 176 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 IGSF9Q9P2J2 1179 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 LIMD1Q9UGP4 676 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 AGO1Q9UL18 857 aaKnown RBP22.58■■□□□ 1.2
C9orf3-222ENST00000496567 ALG6Q9Y672 507 aa22.58■■□□□ 1.2
C9orf3-222ENST00000496567 MOCS2O96007 188 aaPredicted RBP22.57■■□□□ 1.2
C9orf3-222ENST00000496567 PSMC3P17980 439 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 ADRA1BP35368 520 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 SLFN11Q7Z7L1 901 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 YAF2Q8IY57 180 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 RIN3Q8TB24 985 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 OTUB2Q96DC9 234 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 LRRC3BQ96PB8 259 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 PCSK1NQ9UHG2 260 aa22.57■■□□□ 1.2
C9orf3-222ENST00000496567 SPOPO43791 374 aa22.56■■□□□ 1.2
C9orf3-222ENST00000496567 ACSL4O60488 711 aa22.56■■□□□ 1.2
C9orf3-222ENST00000496567 FCHO2Q0JRZ9 810 aa22.56■■□□□ 1.2
C9orf3-222ENST00000496567 ST13P5Q8NFI4 369 aaPredicted RBP22.56■■□□□ 1.2
C9orf3-222ENST00000496567 ALS2CR12Q96Q35 445 aa22.56■■□□□ 1.2
C9orf3-222ENST00000496567 HAPLN3Q96S86 360 aa22.56■■□□□ 1.2
C9orf3-222ENST00000496567 DDX50Q9BQ39 737 aaKnown RBP22.56■■□□□ 1.2
C9orf3-222ENST00000496567 GRID2IPA4D2P6 1211 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 COMTP21964 271 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 ZP2Q05996 745 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 SCAPQ12770 1279 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 BOLA3Q53S33 107 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 ADGRF1Q5T601 910 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 ERMARDQ5T6L9 678 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 DAB2IPQ5VWQ8 1189 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 CCDC185Q8N715 623 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 LRRC57Q8N9N7 239 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 OSCP1Q8WVF1 389 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 PLA2G2FQ9BZM2 168 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 KCNK12Q9HB15 430 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 KCND1Q9NSA2 647 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 STOML2Q9UJZ1 356 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 PAGE1O75459 146 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 PALMO75781 387 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 BMP1P13497 986 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 CHKAP35790 457 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 IFNAR2P48551 515 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 EFHC2Q5JST6 749 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 PSTKQ8IV42 348 aaKnown RBP22.55■■□□□ 1.2
C9orf3-222ENST00000496567 BBS7Q8IWZ6 715 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 TRMT61BQ9BVS5 477 aaKnown RBP22.55■■□□□ 1.2
C9orf3-222ENST00000496567 DUS2Q9NX74 493 aaKnown RBP22.55■■□□□ 1.2
C9orf3-222ENST00000496567 FZD10Q9ULW2 581 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 CAPN6Q9Y6Q1 641 aa22.55■■□□□ 1.2
C9orf3-222ENST00000496567 SCAMP3O14828 347 aaKnown RBP22.54■■□□□ 1.2
C9orf3-222ENST00000496567 KRT7P08729 469 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 SLC25A11Q02978 314 aaKnown RBP22.54■■□□□ 1.2
C9orf3-222ENST00000496567 PDGFRLQ15198 375 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 TRIM58Q8NG06 486 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 UBE2Q2Q8WVN8 375 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 TEKT4Q8WW24 435 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 C1orf74Q96LT6 269 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 PEBP4Q96S96 227 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 RPP25Q9BUL9 199 aaKnown RBP22.54■■□□□ 1.2
C9orf3-222ENST00000496567 OSBPL2Q9H1P3 480 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 GOLPH3Q9H4A6 298 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 ZWILCHQ9H900 591 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 ANLNQ9NQW6 1124 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 ZKSCAN5Q9Y2L8 839 aa22.54■■□□□ 1.2
C9orf3-222ENST00000496567 CHADO15335 359 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 MLLT6P55198 1093 aaPredicted RBP22.53■■□□□ 1.2
C9orf3-222ENST00000496567 GRM2Q14416 872 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 MS4A13Q5J8X5 152 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 LRRC38Q5VT99 294 aa22.53■■□□□ 1.2
C9orf3-222ENST00000496567 POLNQ7Z5Q5 900 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms