RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PCDHGC3Q9UN70 934 aa25.24■■□□□ 1.63
HLA-C-209ENST00000495835 BECN2A8MW95 431 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 PIK3R2O00459 728 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 MAP3K13O43283 966 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 FYNP06241 537 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 NCAM1P13591 858 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 BCKDHBP21953 392 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 TBX4P57082 545 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 PTK2Q05397 1052 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 ARHGAP44Q17R89 818 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 GEN1Q17RS7 908 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 DENND1BQ6P3S1 775 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 DDX50Q9BQ39 737 aaKnown RBP25.23■■□□□ 1.63
HLA-C-209ENST00000495835 TUBGCP2Q9BSJ2 902 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 TLR6Q9Y2C9 796 aa25.23■■□□□ 1.63
HLA-C-209ENST00000495835 MSI1O43347 362 aaKnown RBP25.22■■□□□ 1.63
HLA-C-209ENST00000495835 HOXD9P28356 352 aaPredicted RBP25.22■■□□□ 1.63
HLA-C-209ENST00000495835 WASP42768 502 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 STARD3Q14849 445 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 SF3A2Q15428 464 aaKnown RBP25.22■■□□□ 1.63
HLA-C-209ENST00000495835 VWA3BQ502W6 1294 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 RNF43Q68DV7 783 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 GJB7Q6PEY0 223 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 METTL3Q86U44 580 aaKnown RBP25.22■■□□□ 1.63
HLA-C-209ENST00000495835 WFIKKN2Q8TEU8 576 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 GBP4Q96PP9 640 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 LHX5Q9H2C1 402 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 CACNA2D2Q9NY47 1150 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 STON1Q9Y6Q2 735 aa25.22■■□□□ 1.63
HLA-C-209ENST00000495835 GDF9O60383 454 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 ACSL4O60488 711 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 SNX16P57768 344 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 CYP2U1Q7Z449 544 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 DDX51Q8N8A6 666 aaKnown RBP eCLIP25.21■■□□□ 1.63
HLA-C-209ENST00000495835 DQX1Q8TE96 717 aaKnown RBP25.21■■□□□ 1.63
HLA-C-209ENST00000495835 RLN3Q8WXF3 142 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 FAM149B1Q96BN6 582 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 POPDC2Q9HBU9 364 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 SIX2Q9NPC8 291 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 CALCOCO1Q9P1Z2 691 aa25.21■■□□□ 1.63
HLA-C-209ENST00000495835 CAPN9O14815 690 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 PAPSS1O43252 624 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-209ENST00000495835 AP5Z1O43299 807 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 GLI1P08151 1106 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 EEF1GP26641 437 aaKnown RBP25.2■■□□□ 1.62
HLA-C-209ENST00000495835 USP8P40818 1118 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 DHPSP49366 369 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-209ENST00000495835 BPIFB4P59827 614 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 YWHAZP63104 245 aaKnown RBP25.2■■□□□ 1.62
HLA-C-209ENST00000495835 CCDC6Q16204 474 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 MIIPQ5JXC2 388 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 PIK3R6Q5UE93 754 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 KIAA0907Q7Z7F0 614 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-209ENST00000495835 SLC39A13Q96H72 371 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 NOX5Q96PH1 765 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 ASNSD1Q9NWL6 643 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 CYTH4Q9UIA0 394 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 MBD1Q9UIS9 605 aaPredicted RBP25.2■■□□□ 1.62
HLA-C-209ENST00000495835 DNAJC12Q9UKB3 198 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 CLEC4EQ9ULY5 219 aa25.2■■□□□ 1.62
HLA-C-209ENST00000495835 E5RJQ4 531 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 TSPAN3O60637 253 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 NDUFV2P19404 249 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 HOXD12P35452 270 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 PDCLQ13371 301 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 KIAA1211LQ6NV74 962 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 EVLQ9UI08 416 aaPredicted RBP25.19■■□□□ 1.62
HLA-C-209ENST00000495835 NAALADL1Q9UQQ1 740 aa25.19■■□□□ 1.62
HLA-C-209ENST00000495835 CEP192Q8TEP8 1941 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 WASH3PC4AMC7 463 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 KHNYNO15037 678 aaKnown RBP25.18■■□□□ 1.62
HLA-C-209ENST00000495835 ARID5AQ03989 594 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 ZNF234Q14588 700 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 FAM133BQ5BKY9 247 aaKnown RBP25.18■■□□□ 1.62
HLA-C-209ENST00000495835 EFHC1Q5JVL4 640 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 IL31Q6EBC2 164 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 RBM43Q6ZSC3 357 aaKnown RBP25.18■■□□□ 1.62
HLA-C-209ENST00000495835 AHI1Q8N157 1196 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 ENOX1Q8TC92 643 aaKnown RBP25.18■■□□□ 1.62
HLA-C-209ENST00000495835 FCRL2Q96LA5 508 aaPredicted RBP25.18■■□□□ 1.62
HLA-C-209ENST00000495835 MRGPRX1Q96LB2 322 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 ACP6Q9NPH0 428 aa25.18■■□□□ 1.62
HLA-C-209ENST00000495835 TNRC6BQ9UPQ9 1833 aaKnown RBP25.18■■□□□ 1.62
HLA-C-209ENST00000495835 TYW5A2RUC4 315 aaKnown RBP25.17■■□□□ 1.62
HLA-C-209ENST00000495835 KCNJ18B7U540 433 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 FOXN3O00409 490 aaPredicted RBP25.17■■□□□ 1.62
HLA-C-209ENST00000495835 HLA-FP30511 346 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 KRT9P35527 623 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 IL12RB1P42701 662 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 APBA1Q02410 837 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 KCNJ12Q14500 433 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 STPG1Q5TH74 334 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 SYPL2Q5VXT5 272 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 SYT12Q8IV01 421 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 FAM71AQ8IYT1 594 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 WDTC1Q8N5D0 677 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 PPP1R13BQ96KQ4 1090 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 CIPCQ9C0C6 399 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 PLA2G4CQ9UP65 541 aa25.17■■□□□ 1.62
HLA-C-209ENST00000495835 RAD54BQ9Y620 910 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms