RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 ARRB2P32121 409 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 SLC25A3Q00325 362 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 TNFAIP2Q03169 654 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 OLIG2Q13516 323 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 PPM1JQ5JR12 505 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 THEMIS2Q5TEJ8 643 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 CDKL3Q8IVW4 592 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 PPP1R14CQ8TAE6 165 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 PPP1R13LQ8WUF5 828 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 NLRP7Q8WX94 980 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 NDRG1Q92597 394 aaKnown RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 MTBPQ96DY7 904 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 CSPG4P5Q96PW8 444 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 TBCBQ99426 244 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 ELP3Q9H9T3 547 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 MKS1Q9NXB0 559 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 ERAP1Q9NZ08 941 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 DNAJC16Q9Y2G8 782 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 HES2Q9Y543 173 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF638Q14966 1978 aaKnown RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 A6NJR5 290 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 SDR42E2A6NKP2 422 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 PDGFRBP09619 1106 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 SKIP12755 728 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 CCDC130P13994 396 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 PDE1CQ14123 709 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 DPYSL2Q16555 572 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 N4BP2L1Q5TBK1 243 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 HEATR6Q6AI08 1181 aaKnown RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 MOB2Q70IA6 237 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 GSTCDQ8NEC7 633 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF483Q8TF39 744 aaPredicted RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 DDX50Q9BQ39 737 aaKnown RBP13.43□□□□□ -0.26
PTPN7-217ENST00000495688 NFKBIZQ9BYH8 718 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF358Q9NW07 568 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 RBPJLQ9UBG7 517 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 TUBGCP4Q9UGJ1 667 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 PPM1HQ9ULR3 514 aa13.43□□□□□ -0.26
PTPN7-217ENST00000495688 A8MXQ7 604 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TSPAN1O60635 241 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 BAG2O95816 211 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 FGF3P11487 239 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-217ENST00000495688 ANPEPP15144 967 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 ADORA2BP29275 332 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 SLC26A2P50443 739 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TMEM62Q0P6H9 643 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TUBB3Q13509 450 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 FAM187BQ17R55 369 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 VWA5B1Q5TIE3 1220 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 C1orf146Q5VVC0 180 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 MBLAC2Q68D91 279 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 NCBP2-AS2Q69YL0 99 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 IRGCQ6NXR0 463 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 FAM131BQ86XD5 332 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 ARHGAP24Q8N264 748 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 OR6B3Q8NGW1 331 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 C18orf25Q96B23 403 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-217ENST00000495688 THAP1Q9NVV9 213 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF212Q9UDV6 495 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 ADCY6O43306 1168 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 MAP3K7O43318 606 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 LGALS2P05162 132 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 SERPINA6P08185 405 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TPSB2P20231 275 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 MGAT1P26572 445 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 CPOXP36551 454 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 GTF2A2P52657 109 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 SEMA5AQ13591 1074 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 KCTD2Q14681 263 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TPSAB1Q15661 275 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 RALGPS1Q5JS13 557 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TEDDM1Q5T9Z0 273 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 OR52E8Q6IFG1 317 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 MAVSQ7Z434 540 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 RSPH3Q86UC2 560 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 SESTD1Q86VW0 696 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 TP53INP2Q8IXH6 220 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 PPFIBP2Q8ND30 876 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 USP6NLQ92738 828 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 ZNF184Q99676 751 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-217ENST00000495688 PNPOQ9NVS9 261 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 GJD2Q9UKL4 321 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 KIAA1257Q9ULG3 409 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 C2CD2Q9Y426 696 aa13.42□□□□□ -0.26
PTPN7-217ENST00000495688 DNAJC25-GNG10A0A024R161 153 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 UBTFL6P0CB48 400 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 ACTR3P61158 418 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PITX1P78337 314 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PEX6Q13608 980 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 STILQ15468 1287 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 PIWIL2Q8TC59 973 aaKnown RBP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 HTR3CQ8WXA8 447 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 ATXN7L3BQ96GX2 97 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 QKIQ96PU8 341 aaKnown RBP eCLIP13.41□□□□□ -0.26
PTPN7-217ENST00000495688 SNTG2Q9NY99 539 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 BRCA2P51587 3418 aa13.41□□□□□ -0.26
PTPN7-217ENST00000495688 SYNJ2BP-COX16A0A087WUM0 186 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms