RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 MYO7AQ13402 2215 aa7.24□□□□□ -1.25
VIM-207ENST00000495528 KIAA1217Q5T5P2 1943 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 PIEZO1Q92508 2521 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 SIP14410 1827 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 FIBPO43427 364 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 ATP9AO75110 1047 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 MFAP3LO75121 409 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 STAM2O75886 525 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 SELENOPP49908 381 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 MGAT3Q09327 533 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 TRAF1Q13077 416 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 LPIN1Q14693 890 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 NECTIN1Q15223 517 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 USP17L6PQ6QN14 398 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 GSPT2Q8IYD1 628 aaKnown RBP7.23□□□□□ -1.25
VIM-207ENST00000495528 TTC9BQ8N6N2 239 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 PIBF1Q8WXW3 757 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 ZNF689Q96CS4 500 aaPredicted RBP7.23□□□□□ -1.25
VIM-207ENST00000495528 C22orf23Q9BZE7 217 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 UPF3BQ9BZI7 483 aaKnown RBP7.23□□□□□ -1.25
VIM-207ENST00000495528 LMAN2LQ9H0V9 348 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 KCNH6Q9H252 994 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 ALG13Q9NP73 1137 aaKnown RBP7.23□□□□□ -1.25
VIM-207ENST00000495528 KLHL42Q9P2K6 505 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 MUTYHQ9UIF7 546 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 GIT1Q9Y2X7 761 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 IPPQ9Y573 584 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 MICAL3Q7RTP6 2002 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 FRMPD4Q14CM0 1322 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 ADGRA3Q8IWK6 1321 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 NRCAMQ92823 1304 aa7.23□□□□□ -1.25
VIM-207ENST00000495528 GSTTP1A0A1W2PQM5 241 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 B8ZZF3 427 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 MEIS2O14770 477 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 IFIT3O14879 490 aaKnown RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 TBX10O75333 385 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 ABLIM3O94929 683 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 RAP2AP10114 183 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 FPR1P21462 350 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 DNAJB1P25685 340 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 MARK3P27448 753 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 TCF7P36402 384 aaPredicted RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 TROAPQ12815 778 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 BTG3Q14201 252 aaPredicted RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 HERC4Q5GLZ8 1057 aaPredicted RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 MARCH8Q5T0T0 291 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 CATIPQ7Z7H3 387 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 DNAJB3Q8WWF6 145 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 JPH3Q8WXH2 748 aaPredicted RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 SEPT1Q8WYJ6 367 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 ST8SIA2Q92186 375 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 MIEF2Q96C03 454 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 ZBTB10Q96DT7 871 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 SENP7Q9BQF6 1050 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 LSM14BQ9BX40 385 aaKnown RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 RHOBTB2Q9BYZ6 727 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 CD207Q9UJ71 328 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 ZNF215Q9UL58 517 aaPredicted RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 RUVBL1Q9Y265 456 aaKnown RBP7.22□□□□□ -1.25
VIM-207ENST00000495528 ANKRD6Q9Y2G4 727 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 MYH7BA7E2Y1 1941 aa7.22□□□□□ -1.25
VIM-207ENST00000495528 MBLAC1A4D2B0 266 aaPredicted RBP7.21□□□□□ -1.26
VIM-207ENST00000495528 MUSKO15146 869 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 IPO13O94829 963 aaKnown RBP7.21□□□□□ -1.26
VIM-207ENST00000495528 MMP1P03956 469 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 ITGB1P05556 798 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 CYP21A2P08686 494 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 KCNA2P16389 499 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 CD52P31358 61 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 HSPA4P34932 840 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 WASP42768 502 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 EFEMP1Q12805 493 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 TRDNQ13061 729 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 PPFIA1Q13136 1202 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 WTAPQ15007 396 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 PRKD1Q15139 912 aaPredicted RBP7.21□□□□□ -1.26
VIM-207ENST00000495528 FBXO47Q5MNV8 452 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 AFMIDQ63HM1 303 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 TAF2Q6P1X5 1199 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 APBB1IPQ7Z5R6 666 aaPredicted RBP7.21□□□□□ -1.26
VIM-207ENST00000495528 ADGRD2Q7Z7M1 963 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 RSPH3Q86UC2 560 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 SLC35B2Q8TB61 432 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 SPPL3Q8TCT6 385 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 EDAQ92838 391 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 MSLNLQ96KJ4 702 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 MANSC1Q9H8J5 431 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 TDP1Q9NUW8 608 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 TMEM140Q9NV12 185 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 SNX14Q9Y5W7 946 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 ACTL7AQ9Y615 435 aa7.21□□□□□ -1.26
VIM-207ENST00000495528 COL4A6Q14031 1691 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 E2F8A0AVK6 867 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 ERICH2A1L162 156 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 KRTAP9-7A8MTY7 169 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 EPB41L2O43491 1005 aaKnown RBP7.2□□□□□ -1.26
VIM-207ENST00000495528 AMY1AP04745 511 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 INSRRP14616 1297 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 ZNF20P17024 532 aa7.2□□□□□ -1.26
VIM-207ENST00000495528 PCSK1P29120 753 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms