RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	RAB3IL1	Q8TBN0	382 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	RTP4	Q96DX8	246 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	FERMT1	Q9BQL6	677 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	MAGEB5	Q9BZ81	275 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	IFT122	Q9HBG6	1241 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PLAC1	Q9HBJ0	212 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PDP2	Q9P2J9	529 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	KIAA1257	Q9ULG3	409 aa		13.85	□□□□□ -0.19
SUPT20H-222	ENST00000495071	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	MCF2	P10911	925 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	TFE3	P19532	575 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	AMHR2	Q16671	573 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	OR52E8	Q6IFG1	317 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	NME8	Q8N427	588 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	IL1RAPL1	Q9NZN1	696 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	COL11A1	P12107	1806 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PHIP	Q8WWQ0	1821 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	SNN	O75324	88 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	FKBP6	O75344	327 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PROC	P04070	461 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	CNTF	P26441	200 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	ADORA2B	P29275	332 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	HDAC4	P56524	1084 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	CES3	Q6UWW8	571 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	RIOX2	Q8IUF8	465 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	AGR3	Q8TD06	166 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	FAM149B1	Q96BN6	582 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	XPNPEP3	Q9NQH7	507 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	IGKV6-21	A0A0C4DH24	114 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	HMX2	A2RU54	273 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	SDR42E2	A6NKP2	422 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	MGAT1	P26572	445 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	ADORA2A	P29274	412 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	STIL	Q15468	1287 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	RALGPS1	Q5JS13	557 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	OLFML1	Q6UWY5	402 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PLPPR4	Q7Z2D5	763 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	TFB1M	Q8WVM0	346 aa	Known RBP	13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	USP6NL	Q92738	828 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	PNPO	Q9NVS9	261 aa		13.84	□□□□□ -0.19
SUPT20H-222	ENST00000495071	LYN	P07948	512 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	TPSB2	P20231	275 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	SLC10A2	Q12908	348 aa	Predicted RBP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	CUL3	Q13618	768 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	TPSAB1	Q15661	275 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	MYLK4	Q86YV6	388 aa	Predicted RBP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	HTR3C	Q8WXA8	447 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	CNKSR2	Q8WXI2	1034 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PGBD4	Q96DM1	585 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	LGMN	Q99538	433 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	MKS1	Q9NXB0	559 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ITGA11	Q9UKX5	1188 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PLA2G4C	Q9UP65	541 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PAPSS1	O43252	624 aa	Predicted RBP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	GCAT	O75600	419 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	SERPINE1	P05121	402 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ARF4	P18085	180 aa	Predicted RBP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	CDC16	Q13042	620 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	KCTD2	Q14681	263 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	GSTA3	Q16772	222 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	VWA5B1	Q5TIE3	1220 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	DPY19L2	Q6NUT2	758 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PACS1	Q6VY07	963 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	TTC30A	Q86WT1	665 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	C10orf107	Q8IVU9	208 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	TTC39C	Q8N584	583 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	EFCAB3	Q8N7B9	438 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	COLGALT1	Q8NBJ5	622 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	RNPEP	Q9H4A4	650 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PDZD7	Q9H5P4	517 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	MDM4	O15151	490 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ATP5B	P06576	529 aa	Known RBP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	INSRR	P14616	1297 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	EDNRB	P24530	442 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ITGA9	Q13797	1035 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PPM1J	Q5JR12	505 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ZNF534	Q76KX8	674 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	FAM131B	Q86XD5	332 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PHC3	Q8NDX5	983 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	MRPL45	Q9BRJ2	306 aa	Known RBP	13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	DCDC2	Q9UHG0	476 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	SORCS3	Q9UPU3	1222 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PSME4	Q14997	1843 aa		13.83	□□□□□ -0.2
SUPT20H-222	ENST00000495071	SIN3B	O75182	1162 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	ZMPSTE24	O75844	475 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PFKM	P08237	780 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PDGFRB	P09619	1106 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	MX2	P20592	715 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	GARS	P41250	739 aa	Known RBP	13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PDE1C	Q14123	709 aa	Predicted RBP	13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	TEDDM1	Q5T9Z0	273 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	PDPK2P	Q6A1A2	396 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	DEFB107A	Q8IZN7	70 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	CLEC4C	Q8WTT0	213 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	GATA6	Q92908	595 aa		13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	NR1H4	Q96RI1	486 aa	Predicted RBP	13.82	□□□□□ -0.2
SUPT20H-222	ENST00000495071	LPIN3	Q9BQK8	851 aa		13.82	□□□□□ -0.2

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