RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 GOLGA8SH3BPF8 625 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 LATS1O95835 1130 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 CISD3P0C7P0 127 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 TDGF1P13385 188 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 SLC6A4P31645 630 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 CASP14P31944 242 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 FLT3P36888 993 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 PRKCIP41743 596 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 HARS2P49590 506 aaKnown RBP17.81■□□□□ 0.44
SNX17-209ENST00000494893 PTPN5P54829 565 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 SNX16P57768 344 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 SATB1Q01826 763 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 ZC3H12AQ5D1E8 599 aaKnown RBP17.81■□□□□ 0.44
SNX17-209ENST00000494893 FAM102AQ5T9C2 384 aaPredicted RBP17.81■□□□□ 0.44
SNX17-209ENST00000494893 ZNF571Q7Z3V5 609 aaPredicted RBP17.81■□□□□ 0.44
SNX17-209ENST00000494893 PHLDB2Q86SQ0 1253 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 SYNPOQ8N3V7 929 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 SPEM1Q8N4L4 309 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 CPLX3Q8WVH0 158 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 NPY6RQ99463 290 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 C11orf70Q9BRQ4 267 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 TRIM62Q9BVG3 475 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 ARHGEF4Q9NR80 690 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 TAS2R14Q9NYV8 317 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 WDR35Q9P2L0 1181 aa17.81■□□□□ 0.44
SNX17-209ENST00000494893 ACSL4O60488 711 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 TSPAN3O60637 253 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 KAT7O95251 611 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 GJB6O95452 261 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 NOS2P35228 1153 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 CHKAP35790 457 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 MATKP42679 507 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 RNASE9P60153 205 aaKnown RBP17.8■□□□□ 0.44
SNX17-209ENST00000494893 ASIC2Q16515 512 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 ADGRF1Q5T601 910 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 SFMBT2Q5VUG0 894 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 NUGGCQ68CJ6 796 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 HGSNATQ68CP4 663 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 TSSK4Q6SA08 328 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 MON1BQ7L1V2 547 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
SNX17-209ENST00000494893 NT5C3BQ969T7 300 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 AZIN2Q96A70 460 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 IER2Q9BTL4 223 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 HAUS4Q9H6D7 363 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 FAM86C1Q9NVL1 165 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 DNAJC17Q9NVM6 304 aaKnown RBP17.8■□□□□ 0.44
SNX17-209ENST00000494893 LUC7L2Q9Y383 392 aaKnown RBP17.8■□□□□ 0.44
SNX17-209ENST00000494893 CACNA1HO95180 2353 aa17.8■□□□□ 0.44
SNX17-209ENST00000494893 TCRBV5S1A1TA0A578 114 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 KCNU1A8MYU2 1149 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 LAMTOR5O43504 91 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 MFAP3LO75121 409 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 SP9P0CG40 484 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 SKILP12757 684 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 ADKP55263 362 aaKnown RBP17.79■□□□□ 0.44
SNX17-209ENST00000494893 CDK17Q00537 523 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 NHLH1Q02575 133 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 ARID5BQ14865 1188 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 EMC10Q5UCC4 262 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 RNF43Q68DV7 783 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 RFWD3Q6PCD5 774 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 BNIPLQ7Z465 357 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 DNAAF5Q86Y56 855 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 CNGA4Q8IV77 575 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 UNC45BQ8IWX7 931 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 TC2NQ8N9U0 490 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 TERB1Q8NA31 727 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 USP33Q8TEY7 942 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 PRICKLE1Q96MT3 831 aaPredicted RBP17.79■□□□□ 0.44
SNX17-209ENST00000494893 PHOX2BQ99453 314 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 FAM204AQ9H8W3 233 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 ANLNQ9NQW6 1124 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 METTL5Q9NRN9 209 aaKnown RBP17.79■□□□□ 0.44
SNX17-209ENST00000494893 DDIT4Q9NX09 232 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNX17-209ENST00000494893 DEC1Q9P2X7 70 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 CACNA1IQ9P0X4 2223 aa17.79■□□□□ 0.44
SNX17-209ENST00000494893 SYNJ2BP-COX16A0A087WUM0 186 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 CHURC1-FNTBB4DL54 471 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 PRRT4C9JH25 899 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 I6L893 689 aaPredicted RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 K7ESF4 209 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 DDX3XO00571 662 aaKnown RBP eCLIP17.78■□□□□ 0.441e-10■■■□□ 17.5
SNX17-209ENST00000494893 MOCS2O96007 188 aaPredicted RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 APODP05090 189 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 HOXD9P28356 352 aaPredicted RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 GRIA2P42262 883 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 KIR2DL1P43626 348 aaPredicted RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 NSFP46459 744 aaKnown RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 SEC13P55735 322 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 GSCP56915 257 aaPredicted RBP17.78■□□□□ 0.44
SNX17-209ENST00000494893 ZBED6P86452 979 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 FBXO43Q4G163 708 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 RAB6CQ53S08 254 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 PIK3R6Q5UE93 754 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 GRAMD4Q6IC98 578 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 EMC1Q8N766 993 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 MSANTD4Q8NCY6 345 aa17.78■□□□□ 0.44
SNX17-209ENST00000494893 RPLP0P6Q8NHW5 317 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms