RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 PCGF5Q86SE9 256 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MRGPRGQ86SM5 289 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GALNT15Q8N3T1 639 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SNX33Q8WV41 574 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TBC1D5Q92609 795 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 HAS1Q92839 578 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MTMR8Q96EF0 704 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 BICD1Q96G01 975 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 C8orf48Q96LL4 319 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 NAP1L4Q99733 375 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADAM2Q99965 735 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TIPINQ9BVW5 301 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TLR10Q9BXR5 811 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GANQ9H2C0 597 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SIX2Q9NPC8 291 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 NLRC4Q9NPP4 1024 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 VPS18Q9P253 973 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 WDR35Q9P2L0 1181 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CNOT8Q9UFF9 292 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM169AQ9Y6X4 670 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SF3B1O75533 1304 aaKnown RBP eCLIP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ADGRA3Q8IWK6 1321 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RPTORQ8N122 1335 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYH9P35579 1960 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZMYM2Q9UBW7 1377 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 LGALS16A8MUM7 142 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 BUD23O43709 281 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ATP6V1G2O95670 118 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SCGB1D2O95969 90 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ACADSP16219 412 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 IFNAR1P17181 557 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GM2AP17900 193 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CTNNA2P26232 953 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PSMA5P28066 241 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RPS6KA3P51812 740 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCNHP51946 323 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 NANOS3P60323 173 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GHRHRQ02643 423 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PPP3CAQ08209 521 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 APOFQ13790 326 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 BTG3Q14201 252 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 BMT2Q1RMZ1 405 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TTC31Q49AM3 519 aaPredicted RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 DCAF12L1Q5VU92 463 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 TSHZ3Q63HK5 1081 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 LAIR1Q6GTX8 287 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 UNC13DQ70J99 1090 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 BZW1Q7L1Q6 419 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MCM10Q7L590 875 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GDF7Q7Z4P5 450 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CCDC91Q7Z6B0 441 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 C14orf80Q86SX3 495 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CMTR2Q8IYT2 770 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 AHI1Q8N157 1196 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 AOPEPQ8N6M6 819 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 AMER2Q8N7J2 671 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 OR2I1PQ8NGU4 316 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF473Q8WTR7 871 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 HES6Q96HZ4 224 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PBKQ96KB5 322 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 GSDMAQ96QA5 445 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 DOK1Q99704 481 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SLF1Q9BQI6 1058 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZSWIM1Q9BR11 485 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SELENOOQ9BVL4 669 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 CARD6Q9BX69 1037 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 PRDM13Q9H4Q3 707 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 SAMSN1Q9NSI8 373 aaKnown RBP2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 ETAA1Q9NY74 926 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 RNF14Q9UBS8 474 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 DNAJB4Q9UDY4 337 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 FETUBQ9UGM5 382 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYO6Q9UM54 1294 aa2.75□□□□□ -1.97
CDC42EP3-205ENST00000494083 FAM205AQ6ZU69 1335 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PCDH11XQ9BZA7 1347 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 COL1A2P08123 1366 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 UTRNP46939 3433 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MYO1FO00160 1098 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 WDR46O15213 610 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TLR2O60603 784 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 RAMP2O60895 175 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 T-ENOLP0DO92 83 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 GYPEP15421 78 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PECAM1P16284 738 aaPredicted RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MAN1A1P33908 653 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTGS2P35354 604 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PLA2G5P39877 138 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 PTH2RP49190 550 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZNF844Q08AG5 666 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 DHCR24Q15392 516 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ZRSR2Q15696 482 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 SMN1Q16637 294 aaKnown RBP2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TMEM119Q4V9L6 283 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 TOR2AQ5JU69 321 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 NUGGCQ68CJ6 796 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CASC1Q6TDU7 716 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 CYB5R4Q7L1T6 521 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 ARMC9Q7Z3E5 817 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 MFN1Q8IWA4 741 aa2.74□□□□□ -1.97
CDC42EP3-205ENST00000494083 OTUD6BQ8N6M0 293 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms