RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 NR1H3Q13133 447 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 EIF4EBP2Q13542 120 aaPredicted RBP12.13□□□□□ -0.47
UBA3-211ENST00000493957 RAB6CQ53S08 254 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 EFHC1Q5JVL4 640 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 NADSYN1Q6IA69 706 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 TRIM72Q6ZMU5 477 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 TOGARAM2Q6ZUX3 1019 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 BEND5Q7L4P6 421 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 FAM217AQ8IXS0 508 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 MAML2Q8IZL2 1156 aaPredicted RBP12.13□□□□□ -0.47
UBA3-211ENST00000493957 ZNF397Q8NF99 534 aaPredicted RBP12.13□□□□□ -0.47
UBA3-211ENST00000493957 JOSD2Q8TAC2 188 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 SLC39A13Q96H72 371 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 NELL2Q99435 816 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 BBS2Q9BXC9 721 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 DCLK3Q9C098 648 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 RAB6CQ9H0N0 254 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 CHRDQ9H2X0 955 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 FAM204AQ9H8W3 233 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 ZDHHC4Q9NPG8 344 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 METTL5Q9NRN9 209 aaKnown RBP12.13□□□□□ -0.47
UBA3-211ENST00000493957 AIPL1Q9NZN9 384 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 CLEC4EQ9ULY5 219 aa12.13□□□□□ -0.47
UBA3-211ENST00000493957 CKAP5Q14008 2032 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 TMCO5BA8MYB1 307 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 H0Y858 1186 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 GFRA2O00451 464 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 DDX3XO00571 662 aaKnown RBP eCLIP12.12□□□□□ -0.47
UBA3-211ENST00000493957 TULP3O75386 442 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 MOCS2O96007 188 aaPredicted RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 GLI1P08151 1106 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 TYRP14679 529 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 CASP14P31944 242 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 PRKCIP41743 596 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 RPS9P46781 194 aaKnown RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 ATXN1P54253 815 aaKnown RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 SEC13P55735 322 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 GAD2Q05329 585 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 FAM133BQ5BKY9 247 aaKnown RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 ZC3H12AQ5D1E8 599 aaKnown RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 FYB2Q5VWT5 728 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 HGSNATQ68CP4 663 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 RFWD3Q6PCD5 774 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 TSSK4Q6SA08 328 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 MON1BQ7L1V2 547 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 PHF13Q86YI8 300 aaPredicted RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 EMC1Q8N766 993 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 SERPINB11Q96P15 392 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 TBCBQ99426 244 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 EDEM3Q9BZQ6 932 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 ANLNQ9NQW6 1124 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 SPATA6Q9NWH7 488 aaPredicted RBP12.12□□□□□ -0.47
UBA3-211ENST00000493957 DDIT4Q9NX09 232 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 MARK1Q9P0L2 795 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 TMEM59LQ9UK28 342 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 CAPN11Q9UMQ6 739 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 TLR6Q9Y2C9 796 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 HCN4Q9Y3Q4 1203 aa12.12□□□□□ -0.47
UBA3-211ENST00000493957 ITIH6Q6UXX5 1313 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 CEP192Q8TEP8 1941 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 A0A1W2PQJ5 194 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 I6L893 689 aaPredicted RBP12.11□□□□□ -0.47
UBA3-211ENST00000493957 K7EQS6 105 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 CACNG3O60359 315 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 ACSL4O60488 711 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 RNF40O75150 1001 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 PENKP01210 267 aaPredicted RBP12.11□□□□□ -0.47
UBA3-211ENST00000493957 TNFAIP3P21580 790 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 GGCXP38435 758 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 MATKP42679 507 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 NSFP46459 744 aaKnown RBP12.11□□□□□ -0.47
UBA3-211ENST00000493957 HARS2P49590 506 aaKnown RBP12.11□□□□□ -0.47
UBA3-211ENST00000493957 SULT1E1P49888 294 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 ZBED6P86452 979 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 CDK17Q00537 523 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 SATB1Q01826 763 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 RING1Q06587 406 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 KLHL30Q0D2K2 578 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 GRSF1Q12849 480 aaKnown RBP eCLIP12.11□□□□□ -0.47
UBA3-211ENST00000493957 NME3Q13232 169 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 NNTQ13423 1086 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 ANGPT1Q15389 498 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 DGKKQ5KSL6 1271 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 EMC10Q5UCC4 262 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 C1orf228Q6PIY5 440 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 ZDHHC17Q8IUH5 632 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 VSTM4Q8IW00 320 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 CPXM2Q8N436 756 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 CFAP57Q96MR6 1250 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 PRICKLE1Q96MT3 831 aaPredicted RBP12.11□□□□□ -0.47
UBA3-211ENST00000493957 PNKPQ96T60 521 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 NPY6RQ99463 290 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 TRIM62Q9BVG3 475 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 NUP58Q9BVL2 599 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 NUCKS1Q9H1E3 243 aaKnown RBP12.11□□□□□ -0.47
UBA3-211ENST00000493957 ARHGEF4Q9NR80 690 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 TMPRSS4Q9NRS4 437 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 PIGVQ9NUD9 493 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 FAM86C1Q9NVL1 165 aa12.11□□□□□ -0.47
UBA3-211ENST00000493957 DNAJC17Q9NVM6 304 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms