RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, human

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-238	ENST00000493853	TBC1D3B	A6NDS4	549 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853		K7EQS6	105 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	MAPK13	O15264	365 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	COCH	O43405	550 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	EPN2	O95208	641 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	KAT7	O95251	611 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	VNN1	O95497	513 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	CAVIN2	O95810	425 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	HLA-DRA	P01903	254 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	CYP17A1	P05093	508 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	FAM200B	P0CF97	657 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	IRF1	P10914	325 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ADH5	P11766	374 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	CCDC130	P13994	396 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	MPST	P25325	297 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	OPRD1	P41143	372 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	EIF2D	P41214	584 aa	Known RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	GRIA2	P42262	883 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	TNFRSF4	P43489	277 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	GCLM	P48507	274 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	NDUFA8	P51970	172 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	MRPS21	P82921	87 aa	Known RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ZXDB	P98169	803 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	CREB5	Q02930	508 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ORC1	Q13415	861 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ADAM9	Q13443	819 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	SF3A2	Q15428	464 aa	Known RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ZACN	Q401N2	412 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	PLK5	Q496M5	336 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	PPM1J	Q5JR12	505 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ANO7	Q6IWH7	933 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	RHBDF2	Q6PJF5	856 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	FAM186B	Q8IYM0	893 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	CRYBG2	Q8N1P7	616 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	NAT16	Q8N8M0	369 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	SLC2A14	Q8TDB8	520 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	JAKMIP2	Q96AA8	810 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ZC3H10	Q96K80	434 aa	Known RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	NT5C1A	Q9BXI3	368 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	TPSD1	Q9BZJ3	242 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	GZF1	Q9H116	711 aa	Predicted RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	KCTD10	Q9H3F6	313 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	CCSER2	Q9H7U1	834 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	ARHGEF4	Q9NR80	690 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	VPS45	Q9NRW7	570 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	FAM49B	Q9NUQ9	324 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	GMIP	Q9P107	970 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	DEC1	Q9P2X7	70 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	LSM7	Q9UK45	103 aa	Known RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	TRIM33	Q9UPN9	1127 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	TRAF3IP3	Q9Y228	551 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	INVS	Q9Y283	1065 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	NME7	Q9Y5B8	376 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	PCDHGA5	Q9Y5G8	931 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	SCN1A	P35498	2009 aa		7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	PDCD11	Q14690	1871 aa	Known RBP	7.96	□□□□□ -1.14
RBM39-238	ENST00000493853	F5	P12259	2224 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	DCLK1	O15075	740 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	STX10	O60499	249 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TLR5	O60602	858 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	RHOBTB3	O94955	611 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	ZNF202	O95125	648 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	KLF8	O95600	359 aa	Predicted RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	OLFM2	O95897	454 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	ASS1	P00966	412 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	CD58	P19256	250 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	ACO1	P21399	889 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	ATP5C1	P36542	298 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	MPL	P40238	635 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	EIF1AX	P47813	144 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SLC6A11	P48066	632 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	DHPS	P49366	369 aa	Predicted RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TUB	P50607	506 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SLC8A3	P57103	927 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	KDSR	Q06136	332 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	BYSL	Q13895	437 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	CRY1	Q16526	586 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	HSF5	Q4G112	596 aa	Predicted RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	EOGT	Q5NDL2	527 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	LY6G5C	Q5SRR4	150 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SNX30	Q5VWJ9	437 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SPOPL	Q6IQ16	392 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SDE2	Q6IQ49	451 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	ALKBH2	Q6NS38	261 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	IGF2-AS	Q6U949	168 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	KRBA2	Q6ZNG9	492 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	PAQR9	Q6ZVX9	377 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TRMT11	Q7Z4G4	463 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	FUK	Q8N0W3	1084 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	GUF1	Q8N442	669 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	ALLC	Q8N6M5	410 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	C12orf29	Q8N999	325 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TXNDC5	Q8NBS9	432 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	TMEM174	Q8WUU8	243 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	EZH1	Q92800	747 aa	Predicted RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	CYFIP2	Q96F07	1278 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	HEXIM2	Q96MH2	286 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	XPO6	Q96QU8	1125 aa	Known RBP	7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SMO	Q99835	787 aa		7.95	□□□□□ -1.14
RBM39-238	ENST00000493853	SDCBP2	Q9H190	292 aa		7.95	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms