RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
BRCA1-221ENST00000493795 FICDQ9BVA6 458 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 CLN6Q9NWW5 311 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 WHRNQ9P202 907 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 CRYL1Q9Y2S2 319 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 ALG6Q9Y672 507 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 CLUP10909 449 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 KCNMA1Q12791 1236 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 TOB2Q14106 344 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-221ENST00000493795 MFSD7Q6UXD7 560 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 B3GNT6Q6ZMB0 384 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 ATG14Q6ZNE5 492 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 CYB5R4Q7L1T6 521 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 ZDHHC13Q8IUH4 622 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 MAGEE2Q8TD90 523 aaPredicted RBP8.05□□□□□ -1.12
BRCA1-221ENST00000493795 REEP1Q9H902 201 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 PTGFRNQ9P2B2 879 aa8.05□□□□□ -1.12
BRCA1-221ENST00000493795 LOC100506127A0A0U1RQW1 187 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ATMINO43313 823 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MYL4P12829 197 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TTKP33981 857 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CACNB3P54284 484 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 RHOAP61586 193 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 XRCC4Q13426 336 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MKRN4PQ13434 485 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MYBPC2Q14324 1141 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 HERC6Q8IVU3 1022 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 AMER2Q8N7J2 671 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 LEMD2Q8NC56 503 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 KAT2BQ92831 832 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MYDGFQ969H8 173 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GAL3ST3Q96A11 431 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 OTUD5Q96G74 571 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 DGCR6LQ9BY27 220 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CCSER1Q9C0I3 900 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PABPC3Q9H361 631 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TCF7L2Q9NQB0 619 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 LRRC4BQ9NT99 713 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TBC1D13Q9NVG8 400 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 NDOR1Q9UHB4 597 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SNX6Q9UNH7 406 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ENTPD4Q9Y227 616 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PLXNC1O60486 1568 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 C15orf38-AP3S2A0A0A6YYH1 394 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 BGNP21810 368 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GARTP22102 1010 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CLK3P49761 638 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MAPK10P53779 464 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SCRN3Q0VDG4 424 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 STK4Q13043 487 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 FASTKQ14296 549 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GRB14Q14449 540 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 FAXCQ5TGI0 409 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 DENND5AQ6IQ26 1287 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TTC27Q6P3X3 843 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ARPINQ7Z6K5 226 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TMPRSS6Q8IU80 811 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 FNDC5Q8NAU1 212 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 NEK7Q8TDX7 302 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 COX4I2Q96KJ9 171 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PAFAH2Q99487 392 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 CPVLQ9H3G5 476 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 LY9Q9HBG7 655 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TOR4AQ9NXH8 423 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 LRCH1Q9Y2L9 728 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MRPS7Q9Y2R9 242 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 TRIM3O75382 744 aaPredicted RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SEC22BO75396 215 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ATP5BP06576 529 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ETS1P14921 441 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MUTP22033 750 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 FAUP35544 74 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 KCNJ1P48048 391 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ALDH3A2P51648 485 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MYBPC1Q00872 1141 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 NR1D2Q14995 579 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SLC26A11Q86WA9 606 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ARMC8Q8IUR7 673 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 OR7A2PQ8NGA2 310 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 MYCBPAPQ8TBZ2 947 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 C7orf25Q9BPX7 421 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 COLEC11Q9BWP8 271 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 GSDMCQ9BYG8 508 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 FBXO28Q9NVF7 368 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 DDIT4Q9NX09 232 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PCP4L1A6NKN8 68 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ZBTB22O15209 634 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 PSIP1O75475 530 aaKnown RBP8.04□□□□□ -1.12
BRCA1-221ENST00000493795 IL12AP29459 219 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 NTSP30990 170 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 RGS1Q08116 209 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 SPP2Q13103 211 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 VPS72Q15906 364 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 ADHFE1Q8IWW8 467 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 KBTBD2Q8IY47 623 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 POC5Q8NA72 575 aa8.04□□□□□ -1.12
BRCA1-221ENST00000493795 S100ZQ8WXG8 99 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms