RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 GPATCH2LQ9NWQ4 482 aa20.61■□□□□ 0.89
RNF40-203ENST00000493683 NKRFO15226 690 aaKnown RBP eCLIP20.6■□□□□ 0.89
RNF40-203ENST00000493683 BAIAP3O94812 1187 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 HOXC6P09630 235 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 PABPC1P11940 636 aaKnown RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 CSE1LP55060 971 aaKnown RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 NAA20P61599 178 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 XRCC4Q13426 336 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ANKS6Q68DC2 871 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ACTRT2Q8TDY3 377 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ZBTB10Q96DT7 871 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 TMEM169Q96HH4 297 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 AGXT2Q9BYV1 514 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 TMEM39BQ9GZU3 492 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 AGO4Q9HCK5 861 aaKnown RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 PAEPP09466 180 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 CYP2A7P20853 494 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 TNFRSF8P28908 595 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 CDK16Q00536 496 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 EZH2Q15910 746 aaKnown RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 SERHL2Q9H4I8 314 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 SERHLQ9NQF3 203 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 KCNK4Q9NYG8 393 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 C15orf41Q9Y2V0 281 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ZBTB22O15209 634 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 SNUPNO95149 360 aaKnown RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 ELK3P41970 407 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 MYL6P60660 151 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 NIPA1Q7RTP0 329 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ZCCHC7Q8N3Z6 543 aaKnown RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 OR56A4Q8NGH8 313 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 TCP10LQ8TDR4 215 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 RNFT2Q96EX2 444 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 H0YC42 278 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 KATNA1O75449 491 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ARP10275 920 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 MBL2P11226 248 aaPredicted RBP20.6■□□□□ 0.89
RNF40-203ENST00000493683 POU1F1P28069 291 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 DGUOKQ16854 277 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 FAM131BQ86XD5 332 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 ZDHHC15Q96MV8 337 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 INTS13Q9NVM9 706 aa20.6■□□□□ 0.89
RNF40-203ENST00000493683 IQSEC2Q5JU85 1478 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 CLOCKO15516 846 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 KPNA6O60684 536 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 ANXA6P08133 673 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 SERPINF2P08697 491 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 MARC1Q5VT66 337 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 RSBN1Q5VWQ0 802 aaPredicted RBP20.59■□□□□ 0.89
RNF40-203ENST00000493683 NINJ2Q9NZG7 142 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 A0A087WXM4 84 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 PHGDHO43175 533 aaKnown RBP20.59■□□□□ 0.89
RNF40-203ENST00000493683 UPP2O95045 317 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 CCR1P32246 355 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 PWP1Q13610 501 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 FASTKQ14296 549 aaKnown RBP20.59■□□□□ 0.89
RNF40-203ENST00000493683 PDIA6Q15084 440 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 KCNMB4Q86W47 210 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 DNERQ8NFT8 737 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 STK32AQ8WU08 396 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 REPS1Q96D71 796 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 DUSP12Q9UNI6 340 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 RNASEH1O60930 286 aaKnown RBP20.59■□□□□ 0.89
RNF40-203ENST00000493683 ATG7O95352 703 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 GMPSP49915 693 aaPredicted RBP20.59■□□□□ 0.89
RNF40-203ENST00000493683 LRRC74BQ6ZQY2 392 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 LINC00116Q8NCU8 138 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 HTR3CQ8WXA8 447 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 RORBQ92753 470 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 KCND1Q9NSA2 647 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 PADI4Q9UM07 663 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 TMX2Q9Y320 296 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 THP07101 528 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 PSMB9P28065 219 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 HALP42357 657 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 TXNRD3Q86VQ6 643 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 PALB2Q86YC2 1186 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 MIER2Q8N344 545 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 MIEF2Q96C03 454 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 MIEF1Q9NQG6 463 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 PEX1O43933 1283 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 FSBPO95073 299 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 BMPR2Q13873 1038 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 TRIQKQ629K1 86 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 RIPOR1Q6ZS17 1223 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 ILDR2Q71H61 639 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 ZCCHC9Q8N567 271 aaKnown RBP20.59■□□□□ 0.89
RNF40-203ENST00000493683 MTMR8Q96EF0 704 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 ADPRHL2Q9NX46 363 aa20.59■□□□□ 0.89
RNF40-203ENST00000493683 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 A0A087X1B8 175 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 ASNA1O43681 348 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 SLC2A4P14672 509 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 TSHRP16473 764 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 TSNQ15631 228 aaKnown RBP20.58■□□□□ 0.89
RNF40-203ENST00000493683 FBXO47Q5MNV8 452 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 ZNF280DQ6N043 979 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 CASP12Q6UXS9 341 aa20.58■□□□□ 0.89
RNF40-203ENST00000493683 YTHDF3Q7Z739 585 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms