RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 MAPK13O15264 365 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 F13A1P00488 732 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 ZSCAN22P10073 491 aaPredicted RBP12.91□□□□□ -0.34
SAMM50-205ENST00000493621 KRT13P13646 458 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 HLA-EP13747 358 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 NR2F2P24468 414 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 CSNK1EP49674 416 aaKnown RBP12.91□□□□□ -0.34
SAMM50-205ENST00000493621 YWHAGP61981 247 aaKnown RBP eCLIP12.91□□□□□ -0.34
SAMM50-205ENST00000493621 INTS8Q75QN2 995 aaKnown RBP12.91□□□□□ -0.34
SAMM50-205ENST00000493621 PDZD3Q86UT5 571 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 ARHGAP18Q8N392 663 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 OR2T3Q8NH03 318 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 C1orf216Q8TAB5 229 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 BAHD1Q8TBE0 780 aaPredicted RBP12.91□□□□□ -0.34
SAMM50-205ENST00000493621 RHBDD1Q8TEB9 315 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 SLC2A11Q9BYW1 496 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 KIAA1522Q9P206 1035 aaPredicted RBP12.91□□□□□ -0.34
SAMM50-205ENST00000493621 TRAF3IP3Q9Y228 551 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 RAXQ9Y2V3 346 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 SLCO1B1Q9Y6L6 691 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 APC2O95996 2303 aa12.91□□□□□ -0.34
SAMM50-205ENST00000493621 GOLGA4Q13439 2230 aaKnown RBP12.9□□□□□ -0.34
SAMM50-205ENST00000493621 FLRT2O43155 660 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 TIMM44O43615 452 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 TSPAN3O60637 253 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 ATXN1LP0C7T5 689 aaKnown RBP12.9□□□□□ -0.34
SAMM50-205ENST00000493621 ACSL1P33121 698 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 FNDC3BQ53EP0 1204 aaKnown RBP12.9□□□□□ -0.34
SAMM50-205ENST00000493621 TMPRSS7Q7RTY8 843 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 PIGZQ86VD9 579 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 MARCH9Q86YJ5 346 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 FAM217AQ8IXS0 508 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 FAM186BQ8IYM0 893 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 ZNF366Q8N895 744 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 SLC4A11Q8NBS3 891 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 HNRNPLLQ8WVV9 542 aaKnown RBP12.9□□□□□ -0.34
SAMM50-205ENST00000493621 PLD4Q96BZ4 506 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 CDC6Q99741 560 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 ARID3AQ99856 593 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 PCED1AQ9H1Q7 454 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 LHX5Q9H2C1 402 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 C6orf106Q9H6K1 298 aaPredicted RBP12.9□□□□□ -0.34
SAMM50-205ENST00000493621 TOR4AQ9NXH8 423 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 CFAP45Q9UL16 551 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 PCDHGB2Q9Y5G2 931 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 SNX11Q9Y5W9 270 aa12.9□□□□□ -0.34
SAMM50-205ENST00000493621 PLXNA2O75051 1894 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 A0A1B0GVL5 298 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 PFKFB1P16118 471 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 HOXD9P28356 352 aaPredicted RBP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 AFF3P51826 1226 aaKnown RBP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 TKTL1P51854 596 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 RAD23BP54727 409 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 DNM1Q05193 864 aaKnown RBP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 CAMK2GQ13555 558 aaPredicted RBP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 MPPE1Q53F39 396 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 SOWAHCQ53LP3 525 aaPredicted RBP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 RAB41Q5JT25 222 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 ATL3Q6DD88 541 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 CHST9Q7L1S5 443 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 CYB5D2Q8WUJ1 264 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 NDRG1Q92597 394 aaKnown RBP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 SEMA4DQ92854 862 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 TMEM176AQ96HP8 235 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 ULBP1Q9BZM6 244 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 TMEM8AQ9HCN3 771 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 CISHQ9NSE2 258 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.35
SAMM50-205ENST00000493621 BTBD3Q9Y2F9 522 aa12.89□□□□□ -0.35
SAMM50-205ENST00000493621 GCN1Q92616 2671 aaKnown RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 LOC400499M0QZD8 3231 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 KCNK3O14649 394 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 ZBED1O96006 694 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 MYL1P05976 194 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 PRR29P0C7W0 189 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 HLA-FP30511 346 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 PSMC2P35998 433 aaKnown RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 HARS2P49590 506 aaKnown RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 SLC8A3P57103 927 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 TEAD4Q15561 434 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 TRIP4Q15650 581 aaPredicted RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 NFIL3Q16649 462 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 ARHGAP17Q68EM7 881 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 KRT39Q6A163 491 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 LAYNQ6UX15 382 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 FMNL3Q8IVF7 1028 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 TTC39CQ8N584 583 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 ANKRD52Q8NB46 1076 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 WFIKKN2Q8TEU8 576 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 CCDC47Q96A33 483 aaKnown RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 TM9SF3Q9HD45 589 aa12.88□□□□□ -0.35
SAMM50-205ENST00000493621 OLA1Q9NTK5 396 aaKnown RBP12.88□□□□□ -0.35
SAMM50-205ENST00000493621 ABCB8Q9NUT2 735 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms