RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 ENOSF1Q7L5Y1 443 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 RGL4Q8IZJ4 473 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 TRIML1Q8N9V2 468 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 NELFBQ8WX92 580 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 PRCCQ92733 491 aaPredicted RBP13□□□□□ -0.33
COL6A1-205ENST00000492851 ERCC4Q92889 916 aaPredicted RBP13□□□□□ -0.33
COL6A1-205ENST00000492851 CYP8B1Q9UNU6 501 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 WDR3Q9UNX4 943 aaKnown RBP eCLIP13□□□□□ -0.33
COL6A1-205ENST00000492851 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13□□□□□ -0.33
COL6A1-205ENST00000492851 RAD54BQ9Y620 910 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 EML5Q05BV3 1969 aa13□□□□□ -0.33
COL6A1-205ENST00000492851 TYW5A2RUC4 315 aaKnown RBP12.99□□□□□ -0.33
COL6A1-205ENST00000492851 PPP1R3GB7ZBB8 358 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 WASH3PC4AMC7 463 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 TULP2O00295 520 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 MED7O43513 233 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 AFPP02771 609 aaKnown RBP12.99□□□□□ -0.33
COL6A1-205ENST00000492851 ATP5BP06576 529 aaKnown RBP12.99□□□□□ -0.33
COL6A1-205ENST00000492851 IL12RB1P42701 662 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 ACADSBP45954 432 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 MAPK8P45983 427 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 MARSP56192 900 aaKnown RBP12.99□□□□□ -0.33
COL6A1-205ENST00000492851 RING1Q06587 406 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 KCNH2Q12809 1159 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 SLC14A1Q13336 389 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 MORC3Q14149 939 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 MEA1Q16626 185 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 FUT11Q495W5 492 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 MSANTD2Q6P1R3 559 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
COL6A1-205ENST00000492851 SERPINA13PQ6UXR4 307 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 BHLHA9Q7RTU4 235 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 TMPRSS6Q8IU80 811 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 CCDC117Q8IWD4 279 aaPredicted RBP12.99□□□□□ -0.33
COL6A1-205ENST00000492851 EDEM1Q92611 657 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 SIPA1Q96FS4 1042 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 NUP58Q9BVL2 599 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 ZDHHC5Q9C0B5 715 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 CIPCQ9C0C6 399 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 FBRSQ9HAH7 460 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 SFMBT1Q9UHJ3 866 aa12.99□□□□□ -0.33
COL6A1-205ENST00000492851 SPAG17Q6Q759 2223 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 M0QYV0 167 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 OPHN1O60890 802 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 LTFP02788 710 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 PRKCSHP14314 528 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 CD44P16070 742 aaKnown RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 PAK1Q13153 545 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 ZNF234Q14588 700 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 ST3GAL2Q16842 350 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 PMF1Q6P1K2 205 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 BEND5Q7L4P6 421 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 TRIM59Q8IWR1 403 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 AHI1Q8N157 1196 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 DEFB119Q8N690 84 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 RBBP8NLQ8NC74 664 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 LMO3Q8TAP4 145 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 STK32AQ8WU08 396 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 TFAP2BQ92481 460 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 NDRG1Q92597 394 aaKnown RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 HSPA12BQ96MM6 686 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 SRRTQ9BXP5 876 aaKnown RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 CAPN10Q9HC96 672 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 WSB2Q9NYS7 404 aaPredicted RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 USP36Q9P275 1121 aaKnown RBP12.98□□□□□ -0.33
COL6A1-205ENST00000492851 CNTN6Q9UQ52 1028 aa12.98□□□□□ -0.33
COL6A1-205ENST00000492851 RNF225M0QZC1 329 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 IGLV3-19P01714 112 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 EPHX1P07099 455 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 NCAM1P13591 858 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 HOXD9P28356 352 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 TPMTP51580 245 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 TBX4P57082 545 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 ZBTB16Q05516 673 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 ZNF252P-AS1Q0IIN9 211 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 SFSWAPQ12872 951 aaKnown RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 SEMA3BQ13214 749 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 NNTQ13423 1086 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 PLEKHG6Q3KR16 790 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 KIAA0907Q7Z7F0 614 aaPredicted RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 SLC41A1Q8IVJ1 513 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 DNASE2BQ8WZ79 361 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 SERPINB11Q96P15 392 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 MED15Q96RN5 788 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 MKRN2Q9H000 416 aaKnown RBP12.97□□□□□ -0.33
COL6A1-205ENST00000492851 SUN2Q9UH99 717 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 CTNND2Q9UQB3 1225 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 MYH10P35580 1976 aa12.97□□□□□ -0.33
COL6A1-205ENST00000492851 ATXN2Q99700 1313 aaKnown RBP12.96□□□□□ -0.33
COL6A1-205ENST00000492851 A0A1B0GTW7 788 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 H0Y626 953 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 CAPN9O14815 690 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 ACSL4O60488 711 aa12.96□□□□□ -0.33
COL6A1-205ENST00000492851 TSPAN3O60637 253 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms