RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	C4orf50	Q6ZRC1	276 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	RAB11FIP2	Q7L804	512 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	EFL1	Q7Z2Z2	1120 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	DSG4	Q86SJ6	1040 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CATSPER3	Q86XQ3	398 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CCDC83	Q8IWF9	413 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MCEMP1	Q8IX19	187 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	PDCL2	Q8N4E4	241 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MFSD2A	Q8NA29	543 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	TPCN2	Q8NHX9	752 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CPT1C	Q8TCG5	803 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	JPH3	Q8WXH2	748 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	PKMYT1	Q99640	499 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	NAP1L4	Q99733	375 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	DUSP9	Q99956	384 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	LARP6	Q9BRS8	491 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	TTLL2	Q9BWV7	592 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	RNF26	Q9BY78	433 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CCSER1	Q9C0I3	900 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	NACA2	Q9H009	215 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	USP29	Q9HBJ7	922 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	NCOA5	Q9HCD5	579 aa	Known RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	EPB41L5	Q9HCM4	733 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	KMT5A	Q9NQR1	393 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	GJB4	Q9NTQ9	266 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	FBXL12	Q9NXK8	326 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	ARHGAP28	Q9P2N2	729 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	PISD	Q9UG56	409 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	ERRFI1	Q9UJM3	462 aa	Predicted RBP	5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	PHTF1	Q9UMS5	762 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC27A6	Q9Y2P4	619 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602		U3KQA8	63 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	CCDC168	Q8NDH2	2452 aa		5.68	□□□□□ -1.5
SEC13-219	ENST00000492602	EFCAB7	A8K855	629 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	AGRP	O00253	132 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CASC3	O15234	703 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SLC16A4	O15374	487 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NVL	O15381	856 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	MED24	O75448	989 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	JMJD7	P0C870	316 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	XBP1	P17861	261 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NR1D1	P20393	614 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	TRAPPC10	P48553	1259 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	HARS2	P49590	506 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	PDX1	P52945	283 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NOP14	P78316	857 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CYP27A1	Q02318	531 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SRSF11	Q05519	484 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SSRP1	Q08945	709 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SFSWAP	Q12872	951 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	EIF3I	Q13347	325 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SPIDR	Q14159	915 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	TMEM132D	Q14C87	1099 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NPY5R	Q15761	445 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SV2C	Q496J9	727 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	FNDC3B	Q53EP0	1204 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NAPEPLD	Q6IQ20	393 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	GUSBP11	Q6P575	273 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	PIK3AP1	Q6ZUJ8	805 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	HTR3D	Q70Z44	454 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	ANKS1B	Q7Z6G8	1248 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	DTX1	Q86Y01	620 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	ZNF276	Q8N554	614 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	OR2T34	Q8NGX1	318 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	MYLPF	Q96A32	169 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	TCTN2	Q96GX1	697 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CEP295NL	Q96MC4	621 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	AIFM3	Q96NN9	605 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CATSPER2	Q96P56	530 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	TSPAN18	Q96SJ8	248 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	DUSP23	Q9BVJ7	150 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	HAPLN2	Q9GZV7	340 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NEUROG2	Q9H2A3	272 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CCSER2	Q9H7U1	834 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CAAP1	Q9H8G2	361 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	PREB	Q9HCU5	417 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	PRDM8	Q9NQV8	689 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	NLGN3	Q9NZ94	848 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	SERGEF	Q9UGK8	458 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	CHORDC1	Q9UHD1	332 aa	Predicted RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	FBXO10	Q9UK96	956 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	L1RE1	Q9UN81	338 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	TP53TG5	Q9Y2B4	290 aa		5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	RBM19	Q9Y4C8	960 aa	Known RBP	5.67	□□□□□ -1.5
SEC13-219	ENST00000492602	PRAMEF33	A0A0G2JMD5	474 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602		A0A1W2PP55	124 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	NEMP2	A6NFY4	417 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602		F8VP50	259 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602		K7ESM1	405 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	GREM1	O60565	184 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	PRAMEF10	O60809	474 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	HUS1	O60921	280 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	ATP2C2	O75185	946 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	RNASEH2A	O75792	299 aa	Known RBP	5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	PIAS2	O75928	621 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	NEBL	O76041	1014 aa		5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	NADK	O95544	446 aa	Predicted RBP	5.66	□□□□□ -1.5
SEC13-219	ENST00000492602	C8B	P07358	591 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms