RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 TRIM61Q5EBN2 209 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 DAB2IPQ5VWQ8 1189 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEM270Q6UE05 265 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 RSRC2Q7L4I2 434 aaKnown RBP8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 RABEPKQ7Z6M1 372 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 ADIPOR2Q86V24 386 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 FMNL3Q8IVF7 1028 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 EHBP1Q8NDI1 1231 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 CEP76Q8TAP6 659 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 UBA3Q8TBC4 463 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 STK32AQ8WU08 396 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 NELFBQ8WX92 580 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 DNASE2BQ8WZ79 361 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 KAT5Q92993 513 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 KREMEN1Q96MU8 473 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 NT5C1BQ96P26 610 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 MED15Q96RN5 788 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 MKRN2Q9H000 416 aaKnown RBP8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEM245Q9H330 911 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEM9BQ9NQ34 198 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 CACNA2D2Q9NY47 1150 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 WSB2Q9NYS7 404 aaPredicted RBP8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 HESX1Q9UBX0 185 aa8.75□□□□□ -1.01
SMARCB1-207ENST00000491967 CHD6Q8TD26 2715 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 C10orf142B7Z368 130 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 GIPC1O14908 333 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 GJB3O75712 270 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 FBXO21O94952 628 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 CYBBP04839 570 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 NCAM1P13591 858 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 CD19P15391 556 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 ENGP17813 658 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 HLA-FP30511 346 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 IL12RB1P42701 662 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 GPD2P43304 727 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 HARS2P49590 506 aaKnown RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 COPAP53621 1224 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 RPL6Q02878 288 aaKnown RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 CETN1Q12798 172 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 KCNH2Q12809 1159 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 LRMPQ12912 555 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 NNTQ13423 1086 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 EIF4EBP2Q13542 120 aaPredicted RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 CAMK2GQ13555 558 aaPredicted RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 ZNF234Q14588 700 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 SH3PXD2AQ5TCZ1 1133 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 ISM2Q6H9L7 571 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 PSAPL1Q6NUJ1 521 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 ANKS1BQ7Z6G8 1248 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 PGBD3Q8N328 593 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 CADM4Q8NFZ8 388 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 UCMAQ8WVF2 138 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 EDEM1Q92611 657 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 BHMTQ93088 406 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 TMA16Q96EY4 203 aaKnown RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC39A13Q96H72 371 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 IPO9Q96P70 1041 aaKnown RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 DNAAF2Q9NVR5 837 aaKnown RBP8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 SFMBT1Q9UHJ3 866 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 ANGPTL2Q9UKU9 493 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC6A14Q9UN76 642 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 RAD54BQ9Y620 910 aa8.74□□□□□ -1.01
SMARCB1-207ENST00000491967 IGF2RP11717 2491 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 ZBTB24O43167 697 aaPredicted RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 IRAK2O43187 625 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 LTFP02788 710 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 HMBSP08397 361 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PRKCHP24723 683 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 CD6P30203 668 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 NOVA1P51513 510 aaKnown RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 TPMTP51580 245 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PAK1Q13153 545 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 ARID5BQ14865 1188 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PTPRNQ16849 979 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 FAM133BQ5BKY9 247 aaKnown RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PIK3R6Q5UE93 754 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 NADSYN1Q6IA69 706 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEM110Q86TL2 294 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 TMPRSS6Q8IU80 811 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 IRF2BP1Q8IU81 584 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 ARHGEF19Q8IW93 802 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 SIX6OS1Q8N1H7 587 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PPM1KQ8N3J5 372 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 TRIML1Q8N9V2 468 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 WFIKKN2Q8TEU8 576 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 DDI1Q8WTU0 396 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 TMEM121BQ9BXQ6 578 aaPredicted RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 NUSAP1Q9BXS6 441 aaKnown RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PCED1AQ9H1Q7 454 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 SLC6A17Q9H1V8 727 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PRDM16Q9HAZ2 1276 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 CD93Q9NPY3 652 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 PCDHB4Q9Y5E5 795 aa8.73□□□□□ -1.01
SMARCB1-207ENST00000491967 KNTC1P50748 2209 aa8.72□□□□□ -1.01
SMARCB1-207ENST00000491967 FRYQ5TBA9 3013 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms