RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SOBPA7XYQ1 873 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 CYP26A1O43174 497 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 SART1O43290 800 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 CEP104O60308 925 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 GABBR2O75899 941 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 OAS1P00973 400 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ZDHHC11BP0C7U3 371 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 HDCP19113 662 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ECHS1P30084 290 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 AVPR1AP37288 418 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 GSCP56915 257 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 PTK2Q05397 1052 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 FCHO2Q0JRZ9 810 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 ODF2Q5BJF6 829 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC121Q6ZUS5 278 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 PIGZQ86VD9 579 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 VPS36Q86VN1 386 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 CELF5Q8N6W0 485 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 SLITRK1Q96PX8 696 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 TACO1Q9BSH4 297 aaKnown RBP9.81□□□□□ -0.84
BRCA1-219ENST00000491747 NMUR1Q9HB89 426 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 HEBP1Q9NRV9 189 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 COMMD8Q9NX08 183 aa9.81□□□□□ -0.84
BRCA1-219ENST00000491747 TRAV19A0A0A6YYK7 116 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CHUKO15111 745 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 PI15O43692 258 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 OLFM2O95897 454 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 KRT5P13647 590 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 RDXP35241 583 aaKnown RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 VCPP55072 806 aaKnown RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 MFAP3P55082 362 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF844Q08AG5 666 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SLC44A4Q53GD3 710 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 RAB41Q5JT25 222 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SNX30Q5VWJ9 437 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CWF19L1Q69YN2 538 aaKnown RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 LCLAT1Q6UWP7 414 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 C6orf89Q6UWU4 347 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC13Q8IYE1 715 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SYCE1Q8N0S2 351 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CCDC26Q8TAB7 109 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 BPIFB1Q8TDL5 484 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 DEPDC1BQ8WUY9 529 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 OVCA2Q8WZ82 227 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 NDRG1Q92597 394 aaKnown RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 E2F7Q96AV8 911 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 DNAI2Q9GZS0 605 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CCSER2Q9H7U1 834 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 BRD9Q9H8M2 597 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 PNPLA8Q9NP80 782 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 OBP2AQ9NY56 170 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 RAPGEFL1Q9UHV5 662 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SLC12A6Q9UHW9 1150 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 NAGPAQ9UK23 515 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 DNAJC12Q9UKB3 198 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 KIAA1257Q9ULG3 409 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 USP3Q9Y6I4 520 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 TMCO5BA8MYB1 307 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 DPYSL4O14531 572 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 COCHO43405 550 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CKMP06732 381 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 USP17L7P0C7H9 530 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 UCHL3P15374 230 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CD72P21854 359 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 PPP3CCP48454 512 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF268Q14587 947 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 CNGA2Q16280 664 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 AGBL2Q5U5Z8 902 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 ALKBH5Q6P6C2 394 aaKnown RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 PEX26Q7Z412 305 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SCD5Q86SK9 330 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 FBXL6Q8N531 539 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 LRRC57Q8N9N7 239 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 TTC8Q8TAM2 541 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 UBLCP1Q8WVY7 318 aaPredicted RBP9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SHC3Q92529 594 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 ARHGEF3Q9NR81 526 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 ZMYM5Q9UJ78 669 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 SCML2Q9UQR0 700 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 NFS1Q9Y697 457 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 MIA3Q5JRA6 1907 aa9.8□□□□□ -0.84
BRCA1-219ENST00000491747 A0A1W2PQH9 124 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 FOXN3O00409 490 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 KRIT1O00522 736 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 XPO1O14980 1071 aaKnown RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 CHADO15335 359 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TBX18O95935 607 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 BCAT1P54687 386 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 PPP2R2AP63151 447 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TNK2Q07912 1038 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 BST2Q10589 180 aaKnown RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF77Q15935 545 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 UAP1Q16222 522 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 TRIM68Q6AZZ1 485 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 ENOSF1Q7L5Y1 443 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 BHLHA9Q7RTU4 235 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 ZNF571Q7Z3V5 609 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-219ENST00000491747 IRF2BP2Q7Z5L9 587 aa9.79□□□□□ -0.84
BRCA1-219ENST00000491747 PDZD8Q8NEN9 1154 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms